Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq806 178 3e-39 seq413 152 1e-31 seq819 122 2e-22 >seq806 Length=9869 Score = 178 bits (196), Expect = 3e-39 Identities = 791/1232 (64%), Gaps = 38/1232 (3%) Strand=Plus/Plus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 |||||| ||||| | || || ||||| | ||||| | ||||| ||||||||| Sbjct 5833 GCGATTATCTACGACCGCGACTTCCAGTACAACTTCTTCGGCTTCAAGACGCTGGAGCGC 5892 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || || || | |||||| | | || || ||||||||| | ||||| Sbjct 5893 TCCTACCTGCTGCGCATCAACGGCAAGGTGGCCGAGCGCCCGCAGCACATGCTCATGCGT 5952 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG 248970 ||||| || || || ||| || ||||| || || | |||||||||||| | ||| Sbjct 5953 GTGGCGGTGGGCATCCACGGCGAGGACATCGACGCCGCGATCGAGACGTACAACTACATG 6012 Query 248971 --AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACA 249028 | ||| || | | || || ||| | || ||||| ||||||||||| || ||| Sbjct 6013 TCCGAGAAGGC--GTTCACCCACGCCTCGCCCACGCTGTTCAACGCCGGCACGCCGAACC 6070 Query 249029 ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATG 249088 ||| || |||||||| || | |||| | |||||||| |||| ||||| || | Sbjct 6071 CGCAGATGTCGTCGTGCTTCCTGGTGAGCATGAAGGACGACTCGATCGAGGGCATCTACG 6130 Query 249089 ACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCT 249148 | ||||| || || | ||| || ||| ||||| || ||||| | || Sbjct 6131 AGACGCTCAAGTCCTGCGCCATGATCAGCAAGACCGCTGGCGGTATTGGTCTGAACATCC 6190 Query 249149 CCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCG 249208 | |||||| || | ||| |||||||| || || || ||| |||| | || || | Sbjct 6191 ACTGCATCCGCGCCACGGGCTCGTACATTGCGGGCACCAACGGGTTCAGCAACGGCATTG 6250 Query 249209 TACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------GC 249262 | ||| | || || | | ||| || | | | | |||||| ||| || Sbjct 6251 TGCCCATGCTCCGTGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGC 6310 Query 249263 GCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCC 249322 ||| ||| |||||||||| || |||| ||||||| | || | || |||||| Sbjct 6311 GCC---CGGGCGCGTTCGCCATCTACCTGGAGCCGTGGCACTCGGACGTGTTTGAGTTCA 6367 Query 249323 TGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCC 249382 | ||| || |||||| ||||||| ||| || | || || ||||| ||||||| | Sbjct 6368 TCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCCGGGACCTGTTCTACGCGC 6427 Query 249383 TGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTT 249442 | ||||| | ||| ||||||||||||| || || | ||| || |||||||| | | Sbjct 6428 TCTGGGTGCCGGACCTGTTCATGCGCCGTGTGGAGCGCAACGAGGACTGGACGCTCATGT 6487 Query 249443 CTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCCGACTTCGACCAAGCCTAT 249501 ||| |||| ||||| |||| ||| || | ||||| || ||||| ||| Sbjct 6488 GCCCGGCCGAGTGCCCGGGCCTC-TCGGACTGCTTCGGCGAGGAGTTCGATGCGCTCTAC 6546 Query 249502 AAGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT-TTTTGC 249557 || ||||| | | ||| || || | ||||||| | || || | | | Sbjct 6547 GAGCGGTACGAGCGCGAGGGCCGCGGCCGCCGCTCGGTCAAGGCGCAGAAGCTCTGGTAC 6606 Query 249558 GAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGT 249616 | | | | ||| | ||||| ||||| || |||| | || | | ||| ||| || Sbjct 6607 G-CGATCCTCGAGGCGCAGATCGAGACGGGCAACCCGT-TCATGCTCTACAAGGACTCGG 6664 Query 249617 GCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAG 249676 ||| |||||| ||||| | | || ||||| ||| || || || || | | Sbjct 6665 CGAACCGCAAGAGCAACCAGAAGAACCTCGGTACGATCAAGAGCTCCAACCTGTGCACCG 6724 Query 249677 AGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCAAGCATCAATC 249736 || | || | ||||| || ||||||| |||||| ||||||||||| |||| | Sbjct 6725 AGATCATGGAGTACTCCTCGCCCGAGGAGACTGCCGTGTGCAACCTGGCGTCCATCGCGC 6784 Query 249737 T--CGTGAGGCACGTGAGGG-----CGGACAGGACGTTCGACTTCGAGCGTCTTCACCGG 249789 | | | || |||||| |||| | ||||| | |||||| ||| || ||| | Sbjct 6785 TGCCCTCGTTCA-TTGAGGGCACCACGGAGAAGACGTACAACTTCGCGCGGCTGCACGAG 6843 Query 249790 ACGGCGAAACAGGCGATCAAAAACCTCAACAAGGTGATTGATGTCAATTTTTACCCCCTT 249849 ||| || || | ||| ||||| ||| | | || | |||| | ||||| | Sbjct 6844 GTGGCCAAGGTGGTCACCAAGAACCTGAACCGGATCATCAACATCAACTACTACCCGGTG 6903 Query 249850 GAGGAATGC-AGGTTGTCCAACATGAAGCACCGTCCATGTGGGCTGGGCGTTCAGGCACT 249908 || || || | |||||||||| ||||| || || | || || |||| || Sbjct 6904 GA-GAGCGCGCGCCGGTCCAACATGCGCCACCGCCCGATCGGCATCGGTGTGCAGGGCCT 6962 Query 249909 GCACGACGTCTACATGGTGATGGGATTCCCCTTCGAGTCAG--AGGAGGCAGCGAC-GCT 249965 |||| | |||| | ||||| | ||||||||| ||| ||||| ||| | ||| Sbjct 6963 TGCGGACGCGTTCATGATCATGGGCTACCCCTTCGA--CAGCCCCGAGGC-GCGCCAGCT 7019 Query 249966 AAATAAACAGATTTTCGAGACCATCTATCACG 249997 || ||||| |||||||||||||| |||| Sbjct 7020 GAACCTGCAGATCTTCGAGACCATCTACCACG 7051 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496 || || ||||| || ||| | ||||||||| || |||| ||| || ||||||||| Sbjct 5452 GATGGACGCAAGGAGGCCGTGCGCTTCGACAAGGTCACGGCCCGCGTCTCGAAGCTCTGC 5511 Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556 || || || || |||| ||| || | | | ||| | | || || ||| ||| Sbjct 5512 TACGGGCTCGACATGAACTACGTGGACCCGATCGAGATCACGCGCAAGGTGATTGATGGC 5571 Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616 ||||| || || || || || ||||||| | | || || |||||||| |||||| Sbjct 5572 ATCTACGAGGGTGTCACCACCGTGGAGCTGGACAACCTTGCCGCCGAGACGGCCGCGTAC 5631 Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCG 248653 | | ||| ||||||||||||| || |||| |||| Sbjct 5632 AAGACGACCACACACCCCGACTATGCGGTGCTCGCCG 5668 >seq413 Length=18354 Score = 152 bits (168), Expect = 1e-31 Identities = 260/375 (69%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || ||||||||||| || || ||||| ||||||||||| Sbjct 5498 TGCTATTCTACGGGCCACCAGGTACAGGCAAGACATCGACGATCCTTGCGCTGGCCCGCC 5439 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 ||||| ||| || | |||| ||| ||||| ||||||||||| || ||||| | Sbjct 5438 AGCTGTTTGGCCCGGAGCTGATGAAGTCGCGGGTGCTGGAGCTGAACGCGTCGGACGAGC 5379 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 | ||| | | ||| || ||||| ||| ||||| | || | |||| | ||| | Sbjct 5378 GTGGGATCGGCGTGGTGCGCGAAAAGGTCAAGTCGTTTGCGCGGATGAGCGTGTCGCAGC 5319 Query 254191 TCCAACCCGGC------TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCA 254244 |||| || ||||| | |||| | ||| | || ||||||||||||| || Sbjct 5318 CTGTGGACGGCTATGCGTGCCCGCCGTACAAGATTGTGGTGCTCGACGAGGCGGACAGCA 5259 Query 254245 TGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC-TCCGTTGTGACG 254303 ||||| ||||| ||| |||| | || |||| |||||| | || ||| || ||| Sbjct 5258 TGACGCAGGACGCCCAGGGCGCCTTGCGGCGAATCATGGAGCAGTACAGCCGGAGT-ACG 5200 Query 254304 CGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGC 254363 || || ||||| | |||||||| || || ||| |||| ||||| || || ||||| Sbjct 5199 CGATTCTGCCTCATCTGCAACTATGTTACGCGGATTATCGAGCCGCTTGCGTCGCGGTGT 5140 Query 254364 GCCAAGTTTCGATTC 254378 |||||| || ||| Sbjct 5139 AGCAAGTTCCGCTTC 5125 >seq819 Length=9014 Score = 122 bits (134), Expect = 2e-22 Identities = 200/281 (71%), Gaps = 18/281 (6%) Strand=Plus/Plus Query 254074 TGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCG 254133 || ||||||| | | ||| | ||| ||| ||||| ||||||||||| || ||||| |||| Sbjct 6063 TGCTGGGCGACGCGTACAAG-GAG-GCG-GTGCTGGAGCTGAACGCGTCGGACGACCGCG 6119 Query 254134 GGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGTTCC 254193 || | ||||| || || ||||||||||| | || | | | | | | |||| ||| Sbjct 6120 GGATCGACGTGGTGCGGAACAAGATCAAGGCATTTGCGCAAAAGAAGGT---GTCGCTCC 6176 Query 254194 AACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCG 254253 |||| | || | ||||||| | ||||| ||||||||||||| ||||||| ||| Sbjct 6177 ----CGGCGGGGCGGCA--CAAGCTCATTATCCTCGACGAGGCGGACAGCATGACGCCCG 6230 Query 254254 ACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCC 254313 ||||||| || || || || |||||||||| || | |||||| || ||| Sbjct 6231 GCGCGCAGCAGGCGCTGCGGCGCACGATGGAGATCTACGCAAACACGACGCGCTTCTGCT 6290 Query 254314 TGGTGTGCAACTACGTGTCG---AAGATCATCGCCCCGCTG 254351 | | ||||||| | |||| |||||||||| |||||| Sbjct 6291 TCGCGTGCAACCA---GTCGAACAAGATCATCGAGCCGCTG 6328 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||| | ||| |||||||| ||| | || | |||||| | | | | Sbjct 6345 ATCGCACACCGGCTCTGCAGCGGCTCGATGATCTTGTTCGACTGGTTGCACGCGAAGCAG 6286 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || ||||||||| | | ||| | ||||| | || ||||||||||| || || || Sbjct 6285 AAGCGCGTCGTGTTTGCGTAGATCTCCATCGTGCGCCGCAGCGCCTGCTGCGCGCCGGGC 6226 Query 115522 GTCATCGAGTCTGCCTCGTCGAG 115544 ||||| ||| ||||||||||| Sbjct 6225 GTCATGCTGTCCGCCTCGTCGAG 6203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073743823725888