Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq806 100 4e-16 seq829 87.8 2e-12 >seq806 Length=9869 Score = 100 bits (110), Expect = 4e-16 Identities = 351/538 (65%), Gaps = 10/538 (2%) Strand=Plus/Minus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 |||||||| |||| ||| ||||| | | || || || ||||| || ||||| || | | Sbjct 6347 TGCCACGGCTCCAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACG 6288 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA-TT 66289 || | || ||||| || || || | | ||| || | ||| || ||| || ||| || Sbjct 6287 TAGCGCGCCGTGTTGTTGTACACACGGAGCATGGGCACAATGCCGTTGC-TGAACCCGTT 6229 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACCTATTCCCC 66348 ||| || | || || || | || || || | | || | ||||| || || | Sbjct 6228 GGTGCCCGCAATGTACGAGCCCGTGGCGCGGATGC-AGTGGATGTTCAGACCAATACCGC 6170 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 66408 | || | || ||| | ||||| || | ||| || ||||||||||| || | Sbjct 6169 CAGCGGTCTTGCTGATCATGGCGCAGGACTTGAGCGTCTCGTAGATGCCCTCGATCGAGT 6110 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATT 66466 | ||| ||||| | | || || || ||||| || | || | || || || || Sbjct 6109 CGTCCTTCATGCTCACCAGGAAGCACGACGACATCTGCGGGTTCGGC--GTGCCGGCGTT 6052 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAA 66525 || | || || || ||||| || ||| || || || | |||| ||||||||||| | Sbjct 6051 GAACAGCGTGGGCGAGGCGTGGGTGAACGCCTTCTCGGACATGTAG-TTGTACGTCTCGA 5993 Query 66526 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 66585 | || | ||| || ||| || || || || || |||||||| | ||||||||| | Sbjct 5992 TCGCGGCGTCGATGTCCTCGCCGTGGATGCCCACCGCCACACGCATGAGCATGTGCTGCG 5933 Query 66586 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 66645 | | || | | |||| ||| || || || |||||| |||| || || || | Sbjct 5932 GGCGCTCGGCCACCTTGCCGTTGATGCGCAGCAGGTAGGAGCGCTCCAGCGTCTTGAAGC 5873 Query 66646 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 | || ||||||| ||||| || ||||| ||||| |||||| ||| | ||||| Sbjct 5872 CGAAGAAGTTGTACTGGAAGTCGCGGTCGTAGATAATCGCCGAGTCGAGCGTGTCCTT 5815 >seq829 Length=8684 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| || |||||||| | || | |||||||| || | ||| Sbjct 5530 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGAGAGA 5471 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||||||||| || ||||| || |||||||| || || || || ||||| Sbjct 5470 CCGGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCCGAGAAGAAG 5411 Query 36278 ATTCCTTCTACTGCCGCAAAGGC 36300 || || || || || || || || Sbjct 5410 ATGCCCTCCACCGCGGCGAACGC 5388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159299230440