Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq829 111 2e-19 seq806 104 3e-17 >seq829 Length=8684 Score = 111 bits (122), Expect = 2e-19 Identities = 287/437 (66%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| |||||| |||||||| | || || |||||||| || | ||| Sbjct 5530 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGAGAGA 5471 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||||||||| || ||||| || |||||||| || || || || |||||| Sbjct 5470 CCGGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCCGAGAAGAAG 5411 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC---GCTGTCATGT 50136 || || || || ||||| || || || || | ||| || | |||| || ||| Sbjct 5410 ATGCCCTCCACCGCGGCGAACGCCACCAGGCGCTCGGCAAAGATGGCACGGCGGTCGCTG 5351 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| | ||||| |||||||| || || || || || || || || | Sbjct 5350 ATCCAGCGCAGCGCCCACTCGGCCTTGCGCTTCACCACGGGGATGGTCTCGATCGCGCCA 5291 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| ||| | | || | || || ||||||| || || | Sbjct 5290 AAGAGGAAGTCGCGCTGCTCGGGCTCGCGGATGTAGGTGTCGATCAGCAGCGAGTAGGTC 5231 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 ||||| || ||||| || || ||||| || |||||||| || | ||||||| | Sbjct 5230 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCC 5171 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 ||||| || | | || || || | | || || ||||| || ||||| ||| ||| Sbjct 5170 TGCACCTCGGCGCTGAACCGCTCCACCAGGTTCTCGTTCACAATGCCGTCCGAGGCGGCA 5111 Query 50377 AAAAACGCCAATACATG 50393 || || || | ||||| Sbjct 5110 AAGAAGGCGAGCACATG 5094 >seq806 Length=9869 Score = 104 bits (114), Expect = 3e-17 Identities = 368/565 (65%), Gaps = 10/565 (2%) Strand=Plus/Minus Query 80023 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCC 80082 || |||| |||| | | | || || |||||||| |||| ||| ||||| | | ||| Sbjct 6374 AGGTCGATGAACTCAAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCGAACGCGCCC 6315 Query 80083 GGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 80142 || || ||||| || ||||| || | ||| | || ||||| || || || | | ||| Sbjct 6314 GGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACACGGAGCATG 6255 Query 80143 GGAATAATACCATTGGATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 || | ||| || ||| || ||| ||||| || | || || || |||| || || Sbjct 6254 GGCACAATGCCGTTGC-TGAACCCGTTGGTGCCCGCAATGTACGAGCCCGTGGCGCGGAT 6196 Query 80202 ATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 80260 | | || | ||||| || || || || | || ||| | ||||| || | Sbjct 6195 GC-AGTGGATGTTCAGACCAATACCGCCAGCGGTCTTGCTGATCATGGCGCAGGACTTGA 6137 Query 80261 ACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACA 80320 ||| || ||||||||||| || || || ||||| | | || || || |||| Sbjct 6136 GCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCTCACCAGGAAGCACGACGACA 6077 Query 80321 TTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 80378 | || | || | || || || || || | || || || ||||| || ||| || Sbjct 6076 TCTGCGGGTTCGGC--GTGCCGGCGTTGAACAGCGTGGGCGAGGCGTGGGTGAACGCCTT 6019 Query 80379 TTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTA 80437 || |||| |||| ||||||||||| || || | || || ||| || || || | Sbjct 6018 CTCGGACATGTAG-TTGTACGTCTCGATCGCGGCGTCGATGTCCTCGCCGTGGATGCCCA 5960 Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497 |||| |||||||| | ||||||||| || | || | | |||| || || || || Sbjct 5959 CCGCCACACGCATGAGCATGTGCTGCGGGCGCTCGGCCACCTTGCCGTTGATGCGCAGCA 5900 Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 80557 ||| || |||| || || || || || ||||||| ||||| || ||||| | Sbjct 5899 GGTAGGAGCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTACTGGAAGTCGCGGTCGTAGA 5840 Query 80558 TAATAACCGAGTTGAGTTTATCCTT 80582 |||| |||||| ||| | ||||| Sbjct 5839 TAATCGCCGAGTCGAGCGTGTCCTT 5815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718254066511240