Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq829 271 1e-67 seq806 221 2e-52 >seq829 Length=8684 Score = 271 bits (300), Expect = 1e-67 Identities = 592/872 (68%), Gaps = 37/872 (4%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| |||||| | | || || || ||| | |||||||| ||| |||| ||||| Sbjct 4950 CTGTTCCCCATCCGCTTCCACGAGATCTGGCAGATGTACAAGAAGCACGAGGCGTCCTTC 5009 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | ||| ||| |||| |||||||||||||||||||| ||||| || ||| Sbjct 5010 TGGACCGCCGAGGAGATCGACCTGTCCAAGGACCTGTACGACTGGGACCACCGCCTGAAC 5069 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | || || || | | ||||||||||||| ||| || || || Sbjct 5070 GACAACGAGCGGCACTTCATCAGCCATGTGCTCGCCTTCTTTGCCGCCTCGGACGGCATT 5129 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGT 125232 || ||||| || ||| || || ||| ||| || || || |||| | | Sbjct 5130 GTGAACGAGAACCTGGTGGAGCGGTTCAGCGCCGAGGTG--CAGGCCGCCGAGGCGCGCT 5187 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| |||||||| |||||| | |||||||| | ||||| |||| Sbjct 5188 GCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACCTACTCGCTGCTGA 5247 Query 125293 TTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349 | |||| ||||| ||||| || ||| || | | | |||||| ||| ||||| | Sbjct 5248 TCGACACCTACATCCGCGAGCCCGAGCAGCGCGA---CTTCCTCTTTGGCGCGATCGAGA 5304 Query 125350 CGGTGCC-GTCTATACGTAAA----AAGGCTCAATGGGTGATTCGGTGGATCGATGAC-G 125403 | | || || || || ||||| | |||| | | || |||||| ||| | Sbjct 5305 CCATCCCCGTG-----GTGAAGCGCAAGGCCGAGTGGGCGCTGCGCTGGATCAGCGACCG 5359 Query 125404 ACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT 125463 | | | || | ||||| | |||||||| |||||||| || |||||||||||||| | Sbjct 5360 CCGTGCCATCTTT-GCCGAGCGCCTGGTGGCGTTCGCCGCGGTGGAGGGCATCTTCTTCT 5418 Query 125464 CGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGC 125523 |||| || ||| ||||||| |||||||||||||| || || |||||||| || | Sbjct 5419 CGGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTCTCCT 5478 Query 125524 ACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT 125583 | |||||| | || || || ||||||||||| ||| ||||||||| || |||| Sbjct 5479 TCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTCCTGT 5538 Query 125584 TTCGCAACTATCTGCGTCCCGAGTGCAGATCCAG-CGAT-GAAAAGGTCATCAACATTGT 125641 | || || || | || | || | || || | || ||| ||||| Sbjct 5539 TCAGCCAC-CTC-AAGAAGCGCGCCCACCCCGAGACGGTGGAGAAGATCATC-------- 5588 Query 125642 AACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGAT 125701 ||||| |||||| ||| || | || || || ||||| | || || || |||| Sbjct 5589 -ACCGAGGCCGTGTCGATCGAGAAGGACTTCCTCACCGATGCGCTGCCCGTGGCGCTGAT 5647 Query 125702 TGGCATGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGT 125760 ||||||||| || | || |||||| ||||||| ||||||||||| || || || ||| Sbjct 5648 CGGCATGAAC-GCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTCCTGG 5706 Query 125761 ACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 | | || || |||| |||||||| | || ||||| || |||||| | || Sbjct 5707 TGGCGCTGGGCAACCCCAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACA 5766 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || || |||| ||| | ||||| |||||| Sbjct 5767 TCTCCCTGCAGGGCAAGTCGAACTTCTTCGAG 5798 >seq806 Length=9869 Score = 221 bits (244), Expect = 2e-52 Identities = 393/570 (69%), Gaps = 20/570 (4%) Strand=Plus/Plus Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGC 96884 ||| | ||||| |||||| | ||||||| | | | || ||||| ||||||||| Sbjct 6244 GGCATTGTGCCCATGCTCCGTGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGC 6303 Query 96885 AATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGAC 96944 || || || || ||||| | ||| ||||| |||| || |||||| ||||||| ||||| Sbjct 6304 AACAAGCGCCCGGGCGCGTTCGCCATCTACCTGGAGCCGTGGCACTCGGACGTGTTTGAG 6363 Query 96945 TTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTAT 97004 || ||||| ||||||| ||| ||| || |||| || ||| ||||| |||| || Sbjct 6364 TTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCCCGGGACCTGTTCTAC 6423 Query 97005 GCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------CAACGACGGTGGCTACTGG 97058 || ||||||||||| || |||||||| || || |||||| | ||||| Sbjct 6424 GCGCTCTGGGTGCCGGACCTGTTCATGCGCCGTGTGGAGCGCAACGAGG------ACTGG 6477 Query 97059 AGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118 | || |||||||| | | || || || || || || |||| ||||| ||||| || Sbjct 6478 ACGCTCATGTGCCCGGCCGAGTGCCCGGGCCTCTCGGACTGCTTCGGCGAGGAGTTCGAT 6537 Query 97119 GCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGA 97175 || ||| | ||||||| |||||||| || | || ||| | || | | Sbjct 6538 GCGCTCTACGAGCGGTACGAGCGCGAGGGCCG---CGGCCGCCGCTCGGTCAAGGCGC-A 6593 Query 97176 GAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234 ||| || ||| | || ||| | ||| ||| | ||||| || | |||| ||| ||||| Sbjct 6594 GAAGCTCTGGTACGCGATCCTCGAGGCGCAGATCGAGACGGGCAACCCGTTCATGCTCTA 6653 Query 97235 CAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAA 97294 |||||| | | ||| ||||| |||||||| || | || || |||||| ||||||| Sbjct 6654 CAAGGACTCGGCGAACCGCAAGAGCAACCAGAAGAACCTCGGTACGATCAAGAGCTCCAA 6713 Query 97295 TCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGC 97354 |||||||| || || | |||||| |||| || || ||||| || || ||| ||||| Sbjct 6714 CCTGTGCACCGAGATCATGGAGTACTCCTCGCCCGAGGAGACTGCCGTGTGCAACCTGGC 6773 Query 97355 ATCGGTCAATCTGCCCAAGTTTGTAGAGGG 97384 || || |||||| ||| | ||||| Sbjct 6774 GTCCATCGCGCTGCCCTCGTTCATTGAGGG 6803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043999023160