Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq829 102 1e-16 seq806 100 4e-16 >seq829 Length=8684 Score = 102 bits (112), Expect = 1e-16 Identities = 285/437 (65%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| |||||| |||||||| | || || |||||||| || | ||| Sbjct 5530 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGAGAGA 5471 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 5470 CCGGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCCGAGAAGAAG 5411 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---GCTGTCATGT 33480 || || || || || || || || | || | ||| || | ||| || ||| Sbjct 5410 ATGCCCTCCACCGCGGCGAACGCCACCAGGCGCTCGGCAAAGATGGCACGGCGGTCGCTG 5351 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| |||||||| || || || || || || || || | Sbjct 5350 ATCCAGCGCAGCGCCCACTCGGCCTTGCGCTTCACCACGGGGATGGTCTCGATCGCGCCA 5291 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| ||| | | || | || || ||||||| || || | Sbjct 5290 AAGAGGAAGTCGCGCTGCTCGGGCTCGCGGATGTAGGTGTCGATCAGCAGCGAGTAGGTC 5231 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 ||||| || ||||| || || ||||| || |||||||| || | ||||||| | Sbjct 5230 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCC 5171 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | | || || ||| ||| || || ||||| || ||||| ||| ||| Sbjct 5170 TGCACCTCGGCGCTGAACCGCTCCACCAGGTTCTCGTTCACAATGCCGTCCGAGGCGGCA 5111 Query 33721 AAAAACGCCAATACATG 33737 || || || | ||||| Sbjct 5110 AAGAAGGCGAGCACATG 5094 >seq806 Length=9869 Score = 100 bits (110), Expect = 4e-16 Identities = 365/564 (65%), Gaps = 8/564 (1%) Strand=Plus/Minus Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359 || |||| |||| | | | || || |||||||| |||| ||| ||||| | | || Sbjct 6374 AGGTCGATGAACTCAAACACGTCCGAGTGCCACGGCTCCAGGTAGATGGCGAACGCGCCC 6315 Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419 || || ||||| || ||||| || | ||| | || ||||| || || || | | ||| Sbjct 6314 GGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACACGGAGCATG 6255 Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479 || | ||| ||||| | || ||||| || | || || || |||| || || Sbjct 6254 GGCACAATGCCGTTGCTGAACCCGTTGGTGCCCGCAATGTACGAGCCCGTGGCGCGGATG 6195 Query 63480 TTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538 | | || | ||||| || || || || | || ||| | ||||| || | Sbjct 6194 C-AGTGGATGTTCAGACCAATACCGCCAGCGGTCTTGCTGATCATGGCGCAGGACTTGAG 6136 Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598 ||| || ||||| ||||| || || || ||||| | | || || || ||||| Sbjct 6135 CGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGCTCACCAGGAAGCACGACGACAT 6076 Query 63599 TTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656 || | || | || || || || || | || || || ||||| || ||| || Sbjct 6075 CTGCGGGTTCGGC--GTGCCGGCGTTGAACAGCGTGGGCGAGGCGTGGGTGAACGCCTTC 6018 Query 63657 TCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63715 || || | |||| ||||||||||| || || | ||| || ||| || || || || Sbjct 6017 TCGGACATGTAG-TTGTACGTCTCGATCGCGGCGTCGATGTCCTCGCCGTGGATGCCCAC 5959 Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775 || |||||||| | ||||||||| || | || | | |||| ||| || || || Sbjct 5958 CGCCACACGCATGAGCATGTGCTGCGGGCGCTCGGCCACCTTGCCGTTGATGCGCAGCAG 5899 Query 63776 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63835 |||||| |||| || || || || || ||||||| ||||| || ||||| || Sbjct 5898 GTAGGAGCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTACTGGAAGTCGCGGTCGTAGAT 5839 Query 63836 AATAACCGAGTTGAGTTTATCCTT 63859 ||| |||||| ||| | ||||| Sbjct 5838 AATCGCCGAGTCGAGCGTGTCCTT 5815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622934421795560