Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq579 102 7e-17 seq1241 86.0 5e-12 >seq579 Length=16948 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| |||||||| |||||||| || |||||||||||| | Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||||| || ||||| || | || || ||||| |||||| ||| Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | |||||| | |||| Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACATTCTCAATCGTGTCGGAAGACTCCA 1746 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || ||||| || ||||| || | ||||| Sbjct 1747 CCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq1241 Length=2680 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| || |||||||| || |||||||||||| || || | |||| Sbjct 2400 AGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCT 2459 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || |||| || ||||| |||||| ||| | |||||| ||||| Sbjct 2460 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 2519 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | ||||| || ||| |||| ||| || || Sbjct 2520 TGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTC 2579 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| ||||| || | |||||| Sbjct 2580 TTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079898366590