Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq736 109 4e-19 seq792 98.7 7e-16 >seq736 Length=13068 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct 7744 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATACAGC 7803 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||| ||||||||||||||||| Sbjct 7804 CCATCCATTCATGCGCGCCACTAATTAGATGACGA 7838 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 443 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 502 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 503 GCCAATATTTAGCTTTA 519 >seq792 Length=10340 Score = 98.7 bits (108), Expect = 7e-16 Identities = 201/295 (68%), Gaps = 8/295 (3%) Strand=Plus/Minus Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259 ||||||||||||| ||||| | || |||| ||||||| || |||||||| Sbjct 3844 GTTCTACCGCTACCGCATGCCACTGCTCGAGATCAAGATCGAGGGCCGTGGCAACGGTAT 3785 Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319 || || || ||| ||||||| | || || | ||||| | ||||| | || || Sbjct 3784 CAAGACGGTGATTCCCAACATGTCGGACATCTCACGTGCGCTGAGCCGCCCGCCGACGTA 3725 Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGA 6379 |||||| || || || || ||||| || || || ||||| | | ||| | || ||| Sbjct 3724 CCCGACCAAGTACTTTGGCTGCGAGCTCGGGGCGCAGACAGTGATCGATGAGAAGGGCGA 3665 Query 6380 GCGCTTCATCGTTAACGGATCGCATAACTCTGCCAA---GCTGCAGGACTTACTTGACGG 6436 || | ||| || ||||| |||| || ||||| ||||| || || || ||||| Sbjct 3664 CCGTTACATTGTGAACGGTGCGCACGAC---GCCAACCGGCTGCGTGAGTTGCTGGACGG 3608 Query 6437 CTTTATTCGCAAGTTTGTGCTGTGTCGGGAA-TGCGATAACCCGGAGACCGAGCT 6490 ||| || | ||||||||||| ||| || ||| | ||||| ||||| || || Sbjct 3607 CTTCATCGACCGCTTTGTGCTGTG-CGGCAACTGCAAGAACCCTGAGACGGACCT 3554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940501160671