Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq829 172 1e-37 seq1061 131 3e-25 seq1010 89.7 1e-12 seq764 84.2 4e-11 >seq829 Length=8684 Score = 172 bits (190), Expect = 1e-37 Identities = 307/440 (70%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 |||||||| |||||||| || |||||||||| ||| ||||| |||||||||||||||| Sbjct 5806 ACACGGCGCTCGAAGAAGTTCGACTTGCCCTGCAGGGAGATGTTCTCCATGAAGTCGAAG 5747 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || || ||||| | |||||| | ||| || || || | || |||||| |||||| Sbjct 5746 GGGTTGGTCGCGTTGTAGTACTTGGGGTTGCCCAGCGCCACCAGGAGGCGGTCCGCCACA 5687 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| || || || | || Sbjct 5686 AACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGCCACGGGCAGCGC 5628 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || || ||| ||||| ||| | | || ||||| | || || |||| || Sbjct 5627 ATCGGTGAGGAAGTCCTTCTCGATCGACACGGCCTCGGTGATGATCTTCTCCACC-GTCT 5569 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 | | | || | |||| || | | ||||||| | |||| | |||||| | Sbjct 5568 CGGGGTGGGCGCGCTTCTTGAGGTGGCTGAACAGGAGGCAGGCAAAGTCGGTGTGCAGGC 5509 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| || ||||| ||||||||| | || || ||||||| ||||| ||| Sbjct 5508 CCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGAGAGACCGGGCATCAGGCCACGCTTCT 5449 Query 251912 TGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 ||||||||||||| | ||| ||||| || ||||| | | ||||| || | | Sbjct 5448 TGAGCCAGAAGATGGACGC-GAAGGAGCCCGAGAAGAAGATGCCCTCCACCGCGGCGAAC 5390 Query 251971 GCAACAAGGCGCTCAGCAAA 251990 || || |||||||| ||||| Sbjct 5389 GCCACCAGGCGCTCGGCAAA 5370 >seq1061 Length=4129 Score = 131 bits (144), Expect = 3e-25 Identities = 337/506 (67%), Gaps = 12/506 (2%) Strand=Plus/Plus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGT 218561 ||||| || | ||||| ||| |||||||||| || || ||||| |||| | | | Sbjct 2437 ATCCCGATCTCGGACTTTATCAACAAGGAGCTGATCCTCTTCTCCATGGCGG-ACAACAT 2495 Query 218562 GGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTT 218621 || || || ||| |||||||||||||||||||| ||||| ||| | || || Sbjct 2496 C---CGGTCCATCCCCTCGGTGGTGGATGGCCTCAAGCCCGGTCAGCGCAAGGTGCTATT 2552 Query 218622 TGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGT 218681 || | |||||||| |||||| || || |||||||| ||| | ||||| || Sbjct 2553 TGGCTGCTTCAAGCGCAACCTGCGGACCGAGATCAAGGTCGCGCAGCTGCAGGGTTACGT 2612 Query 218682 ATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCA 218740 || || | | ||||| ||||| || ||||| || | || | ||||| ||| Sbjct 2613 GTCGGAGCACACGGCGTACCACCACGGCGACCAGAGCCTT-ACCATGACGATTGTCGGCC 2671 Query 218741 TGGCACAGGACTA-TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTT 218799 | || ||||||| || ||| || |||||| ||||| |||| | || ||||||||||| Sbjct 2672 TTGCGCAGGACTTCTGCGGG-AGCAACAACGTGAACCTGCTCATGCCGAACGGTCAGTTC 2730 Query 218800 GGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTG 218859 ||| | || |||| || ||||| ||| ||| | || || || || | || Sbjct 2731 GGTACGCGCAGCATGGGCGGCAAGGACGCTGCCAGCGCCCGTTACATTTTCACCGCGGTG 2790 Query 218860 TCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAG 218919 ||| | | || |||| ||||| | | | || || | ||| || || || || || Sbjct 2791 CCGCGCATCACCCGCCGTCTGTTCCACCCGCAGGACGACGCGCTGCTCAACTACCTGGAC 2850 Query 218920 GACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTA 218979 ||||| || || |||||||||||||| ||||| | | ||| |||| | Sbjct 2851 GACGACGGGCAGAGCATCGAGCCCGAGTGGTACGTGCCGGTGGTGCCGCAGGTGCTGCTG 2910 Query 218980 AATGGTGCCAATGGTATCGGGACAGG 219005 || |||| | | |||||||| || || Sbjct 2911 AACGGTGGCGAGGGTATCGGCACGGG 2936 >seq1010 Length=28876 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 ||| ||||| |||| | ||||||||||| || |||| ||||| ||||| ||| | | Sbjct 11304 GGACCTGTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTGAACACGGC 11245 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 | ||| | | ||||||||| |||| || |||||| || | ||| || |||| || Sbjct 11244 CACCCTGCGCCTGAAGCGTGGCCACCGCTACGGTCTCTGTGGCCGCAACGGTTCGGGCAA 11185 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGA 279529 | ||| || ||||| ||||| ||||| ||| |||| || || || | | || Sbjct 11184 GTCCACGCTCATGCGTGCCATCCAGAACGGCCAGGTGGAGGGCTTCCCGTCCCCCGAGGA 11125 Query 279530 GGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||| | || ||| || ||||||||| | ||| Sbjct 11124 GGTGCGCACCTGGTACGTGGAGCACGACCTGGAC 11091 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || |||||||| |||||||||||||| ||||| | || ||| | || | |||||| Sbjct 10958 TCCCTCTCGGGTGGCTGGAAGATGAAGCTCGCCCTGGCACGTGCCGTGCTGTTCCGTGCC 10899 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || |||| ||||| || ||||| || |||||| ||||| ||||| ||| | Sbjct 10898 GACATCCTGCTGCTGGACGAGCCGACGAACCACCTGGACGTGCTGAACGTCAAGTGGATC 10839 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 |||||| | ||| |||| || | || ||||||| || |||||||| Sbjct 10838 ACCGACTACCTCAACAGCCTGACCAACACCACCTCGATCATTGTGTCGCACGACTCCAAG 10779 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCAC 279914 ||||| | ||||||| ||| |||| | ||| Sbjct 10778 TTCCTCAACAACGTGTGCACTGACATCCTGCAC 10746 >seq764 Length=11498 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 280727 TGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGAT 280786 ||| || ||||||||||| | || | | || || |||||| | |||| || ||| | Sbjct 3889 TGGCGGGCAGAAGGTCAAGGTGGTGCTTGCCGCGGCGCTGTGGAACAACCCGCAGGTGCT 3948 Query 280787 CGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 ||| ||||||||||| |||||||| |||||||||||| || |||| ||| Sbjct 3949 CGTGCTCGACGAGCCGACCAACTACCTGGACCGCGAGGCGCTCGGCGGTCT 3999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027815189410081