Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq824 127 5e-24 seq579 122 2e-22 seq1241 104 6e-17 >seq824 Length=8870 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || || || | |||||| || || ||||| || |||||| ||| ||||| ||||| Sbjct 6987 AAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTC 7046 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || |||||||||| ||||| || ||||| || || || || Sbjct 7047 CTCGAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTC 7106 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||||| || | |||||| | || || | ||| |||| || || || ||||||||||| Sbjct 7107 CTGGACCTTGGACTTCACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGT 7166 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || |||||||||| ||| || ||||| Sbjct 7167 CTTGCCAGTAAGAGTCTTGATGAAGATTTGCAT 7199 >seq579 Length=16948 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || |||||| Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || || || ||||||||||||||||| || || Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | ||| || || || Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACC 1748 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || ||||| ||||||||||| | ||||| Sbjct 1749 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq1241 Length=2680 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || |||||||| | || || || ||||| || |||||| Sbjct 2385 CCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2444 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || |||||||| | || || || ||||| ||||| ||||| || || Sbjct 2445 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 2504 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 2505 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 2564 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| || || || ||||||||||| | |||||| Sbjct 2565 TCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || || || || | ||| || || ||||| || |||||| Sbjct 2157 CCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2216 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || |||||||| ||||| || || Sbjct 2217 AGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 2276 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 2277 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 2336 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| || || || ||||||||||| | |||||| Sbjct 2337 TCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179629597397598