Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1010 93.3 9e-14 seq1061 84.2 5e-11 >seq1010 Length=28876 Score = 93.3 bits (102), Expect = 9e-14 Identities = 315/486 (65%), Gaps = 11/486 (2%) Strand=Plus/Plus Query 333795 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 333854 ||||| || || ||||||| ||||||||| |||||||| | | | || | Sbjct 10759 GTGCACACGTTGTTGAGGAACTTGGAGTCGTGCGACACAATGATCGAGGTGGTGTTGGTC 10818 Query 333855 AGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 333914 ||| || | ||||| || | | |||| | ||||| ||| || ||||| |||||| Sbjct 10819 AGGCTGTTGAGGTAGTCGGTGATCCACTTGACGTTCAGCACGTCCAGGTGGTTCGTCGGC 10878 Query 333915 TCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 333974 ||||| || || || | | || | |||| |||||||| || ||||| ||||| Sbjct 10879 TCGTCCAGCAGCAGGATGTCGGCACGGAACAGCACGGCACGTGCCAGGGCGAGCTTCATC 10938 Query 333975 TTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGAT-TGGCGCTCAATATCAAAGCCAAC 334033 ||||| || || || || | | || || || | | ||||||| || ||||| | Sbjct 10939 TTCCAGCCACCCGAGAGGGAGAAGAT-GGAGCTGTTCTGGCGCTGGTCGTCGAAGCCCAT 10997 Query 334034 CGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTACTTGTTCATC 334093 | | || || | | | ||||| | ||| | || ||||| | | Sbjct 10998 CTCCTTGAGCGTGGCCGAGGCGCTGTCACG-GTCCACGT----TCAGCCGCTTGTCCGCC 11052 Query 334094 ATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCAC 334153 | | |||||||| || || | | || | ||||| ||||| || ||||| ||||| Sbjct 11053 A----CGATGAAGTCGATAATCGACTGGTCACCCTCGGAGCCGTCCAGGTCGTGCTCCAC 11108 Query 334154 GTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGC 334213 ||| || || | || | || ||||| || || | ||| |||||| || || Sbjct 11109 GTACCAGGTGCGCACCTCCTCGGGGGACGGGAAGCCCTCCACCTGGCCGTTCTGGATGGC 11168 Query 334214 GCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACG 334273 ||||| || || || || |||| ||||| | ||||| ||||||||||||| ||||| Sbjct 11169 ACGCATGAGCGTGGACTTGCCCGAACCGTTGCGGCCACAGAGACCGTAGCGGTGGCCACG 11228 Query 334274 CTTCAG 334279 |||||| Sbjct 11229 CTTCAG 11234 >seq1061 Length=4129 Score = 84.2 bits (92), Expect = 5e-11 Identities = 199/288 (69%), Gaps = 12/288 (4%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC-TGCAATCTCGAACCGAACTG 297495 |||||||| || || || || || ||||| || ||| ||| | || ||||||||| Sbjct 2783 GTGAAAATGTAACGGGCGCTGGCAGCGTCCTTGCCGCCCATGCTG-CGCGTACCGAACTG 2725 Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCA 297554 || | ||||| | | ||| | ||| ||||| ||| || || ||||| |||||| | Sbjct 2724 ACCGTTCGGCATGAGCAGGTTCACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGA 2666 Query 297555 CGATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTA 297612 | || ||| || || || ||||| ||||| || || | ||||| | ||||| Sbjct 2665 CAATCGTCA--TGGTAAGGCTCTGGTCGCCGTGGTGGTACGCCGTGTGCTCCGACACGTA 2608 Query 297613 ACCGCTGAA-CTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATAT 297670 ||| ||| | ||| || ||||| | |||||| || ||||||||| |||| | | || Sbjct 2607 ACC-CTGCAGCTGCGCGACCTTGATCTCGGTCCGCAGGTTGCGCTTG-AAGCAGCCAAAT 2550 Query 297671 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATG 297718 | ||| || || ||| || |||| ||||| || ||||| || ||| Sbjct 2549 AGCACCTTGCGCTGACCGGGCTTGAGGCCATCCACCACCGAGGGGATG 2502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102856811603350