Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq579 105 7e-18 seq1241 100 3e-16 seq829 89.7 5e-13 seq806 84.2 2e-11 >seq579 Length=16948 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | |||||| || || || |||||||| || Sbjct 1568 ACCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 1627 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || |||||||||||||| | || || ||||||||||| ||||| Sbjct 1628 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 1687 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| ||| | || || | ||||| Sbjct 1688 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCAC 1747 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| |||| || || ||||| | |||||| Sbjct 1748 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq1241 Length=2680 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||||| | ||||| || || | |||||| || || || |||||||| || Sbjct 2156 ACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 2215 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || |||||||||||||||||| | || || ||||||||||| || || Sbjct 2216 CAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 2275 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || ||| | || || || || || Sbjct 2276 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGAC 2335 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| | ||||| Sbjct 2336 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| ||||| | ||||| || || || |||||||| || Sbjct 2384 ACCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 2443 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| |||||||||||||| |||| || ||||||||||| ||||| Sbjct 2444 CAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGG 2503 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || ||| | || || || || || Sbjct 2504 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGAC 2563 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| | ||||| Sbjct 2564 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 >seq829 Length=8684 Score = 89.7 bits (98), Expect = 5e-13 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 132539 GTATTCGCCCACTCGACGTTCGAAAAAGTTTGTCTTGCCCTCCAGCGATATGTTGTTCAT 132598 ||| |||||||| || || ||||| ||||| | |||||||| ||| || ||||| | ||| Sbjct 5816 GTAGTCGCCCACACGGCGCTCGAAGAAGTTCGACTTGCCCTGCAGGGAGATGTTCTCCAT 5757 Query 132599 GAAATTAAAAGGATTGGGTGTGTTAAAATGTTTGGGTTGTTGC--AGCTCTGTAAGCAAC 132656 ||| | || || |||| | ||| | | ||||| ||||| ||| | || | Sbjct 5756 GAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTGGG--GTTGCCCAGCGCCACCAGGAGG 5699 Query 132657 CGATCCGCCACAAACTCGATATATTCGCACATGGCGCGCGAATTCATACC 132706 || |||||||||||||| || || | ||||||| ||||| ||||| || Sbjct 5698 CGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCC 5649 >seq806 Length=9869 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 155353 AGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCA 155412 ||||||| || ||||| |||||||| ||||| ||||| || || | |||||| |||| Sbjct 6007 AGTTGTACGTCTCGATCGCGGCGTCGATGTCCTCGCCGTGGATGCCCACCGCCACACGCA 5948 Query 155413 TCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGC 155456 | |||||||| || |||||| || || ||||||||||||| Sbjct 5947 TGAGCATGTGCTGCGGGCGCTCGGCCACCTTGCCGTTGATGCGC 5904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634551036040