Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq829 129 6e-25 seq579 125 7e-24 seq1241 116 4e-21 seq806 105 6e-18 seq824 89.7 5e-13 >seq829 Length=8684 Score = 129 bits (142), Expect = 6e-25 Identities = 306/459 (67%), Gaps = 29/459 (6%) Strand=Plus/Plus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 ||||| || || | || |||||| || |||||| |||||||||||||| ||| ||| Sbjct 5373 GCCGAGCGCCTGGTGGCGTTCGCCGCGGTGGAGGGCATCTTCTTCTCGGGCTCCTTCGCG 5432 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 | || || | | || | || | |||||||| ||| | || ||||||||| Sbjct 5433 TCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTCTCCTTCTCCAACGAGCTC 5492 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACA-ACACTAGAGT 47311 |||||| | ||||| |||||||||||| |||||||||| ||| | || ||| Sbjct 5493 ATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTCCTGTTCAGCCAC------ 5546 Query 47312 CGATCAA-AAGTTGGACGTGCCCACCGTCAG-CG-------ACATGTTTGCCGAAGCCGT 47362 |||| ||| || ||||||| || || | || | |||| ||||| Sbjct 5547 --CTCAAGAAG-----CGCGCCCACCCCGAGACGGTGGAGAAGATCATCACCGAGGCCGT 5599 Query 47363 CGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGC 47422 | || |||| ||| || || |||| || ||||||| | | | || |||||||| Sbjct 5600 GTCGATCGAGAAGGACTTCCTCACCGATGCGCTGCCCGTGGCGCTGATCGGCATGAACGC 5659 Query 47423 GGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTA 47482 | | ||| | ||||||| || ||||| || |||||||| || || ||| | Sbjct 5660 GCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTCCTGGTGGCGCTGGGCAA 5719 Query 47483 TCCCAAGATTTACCACACCGAG---AATCCATTCGAGTTTATGAACAACATTTCGCTCGA 47539 |||||| ||| ||| || | || || ||||| || ||| | ||||| || || | Sbjct 5720 CCCCAAG---TACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGCA 5776 Query 47540 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||||| | ||||| |||||| || || ||||| || Sbjct 5777 GGGCAAGTCGAACTTCTTCGAGCGCCGTGTGGGCGACTA 5815 >seq579 Length=16948 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||||| || | ||| ||||| || || || ||||| ||| Sbjct 1566 GCACCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1625 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || |||||| || || ||||| || || ||| |||||| |||||||| || ||| Sbjct 1626 CTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGA 1685 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| || ||| | | || | ||||| | | ||| Sbjct 1686 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCC 1745 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| ||||| ||||| || || || || | ||||||| Sbjct 1746 ACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATGG 1797 >seq1241 Length=2680 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| ||||| || | ||| ||||| || || || ||||| |||| | Sbjct 2157 CCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2216 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || |||||| |||||||| || || || Sbjct 2217 AGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 2276 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 2277 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 2336 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| ||||| || || || || || || | |||||| Sbjct 2337 TCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||| | ||| | || ||||| || || || ||||| |||| | Sbjct 2385 CCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2444 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || ||||| || || ||| | |||| |||||||| || ||||| Sbjct 2445 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 2504 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 2505 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 2564 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| ||||| || || || || || || | |||||| Sbjct 2565 TCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 >seq806 Length=9869 Score = 105 bits (116), Expect = 6e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || |||| |||||||| |||||||||||||| || || | || || | |||||| ||| Sbjct 7357 ACGGGTTCACCACCTGGAACTCGCCGGCGAGCACACGGCGCATGTAGATGTTGCTCGTGT 7298 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 |||||||||| |||||||| ||||| ||||| ||| | || || |||||| || Sbjct 7297 ACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGGCTCGTGGATGCCGTGGGCATGGGCG 7238 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTG 146207 | | ||||| ||||| | || |||||| Sbjct 7237 CGAGCAGCAGCGAGTTGCGCAGGCCGTG 7210 Score = 96.9 bits (106), Expect = 3e-15 Identities = 288/437 (66%), Gaps = 27/437 (6%) Strand=Plus/Minus Query 147064 TCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGA 147120 |||| ||||| ||||||| ||| ||||| ||||| ||||| |||||||| Sbjct 6353 TCCGAGTGCCACGGCTCCAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCGCCCTGG 6294 Query 147121 TCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCG--GATT 147178 || |||| |||| || |||| ||| | || || | ||||| ||| | |||| | || Sbjct 6293 TCCACGTAGCGCGCCGTGTTGTTGTACACACGGAGCATGGGCACAATGCCGTTGCTGAAC 6234 Query 147179 TTGT-GGTGCCGT---TGTATTGAGC-------GCTGACGCTTTGCACGCTCAGCCCGAG 147227 || |||||| |||| |||| || || || || | | |||| || | Sbjct 6233 CCGTTGGTGCCCGCAATGTAC-GAGCCCGTGGCGCGGATGCAGTGGATGTTCAGACCAAT 6175 Query 147228 ACCTCCGCCCAGATTCGAAATCAAAGCG---GACTCGTGCAAGGTCTTGTAGATGCCGTC 147284 ||| || | || |||| ||| |||| | || |||| ||||||||| || Sbjct 6174 ACCGCCAGCGGTCTTGCTGATCATGGCGCAGGACTTGAGC---GTCTCGTAGATGCCCTC 6118 Query 147285 GATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCC 147344 ||| ||| ||||| |||| |||||| ||||| |||| || || |||||| Sbjct 6117 GATCGAGTCGTCCTTCATGCTCACCAGGAAGCACGACGACATCTGCGGGTTCGGCGTGCC 6058 Query 147345 CGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGCCCAGACTCATCAATTGATAC 147402 || ||||||||||| |||||| ||||||| | | | || ||| | | ||| Sbjct 6057 GGCGTTGAACAGCGTGGGCGAGGCGTGGGTGAACGCCTTCTCGGA--CATGTAGTTGTAC 6000 Query 147403 GTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATG 147462 || || || ||| | ||| |||||||| ||| ||| || || |||||||||||| Sbjct 5999 GTCTCGATCGCGGCGTCGATGTCCTCGCCGTGGATGCCCACCGCCACACGCATGAGCATG 5940 Query 147463 TGCTGGGGTCGTTCCGC 147479 ||||| || || || || Sbjct 5939 TGCTGCGGGCGCTCGGC 5923 >seq824 Length=8870 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | ||||| || || ||||| || || ||| | Sbjct 7008 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAA 7067 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 |||||| |||||||| || ||||| || |||||||||||| || || ||| | | | Sbjct 7068 GATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGACCTTGGACTTCACGAT 7127 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| ||||| | |||||| || | || | ||| ||||| || ||||| || | Sbjct 7128 G-TCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTTGCCAGTAAGAGTCTTGA 7186 Query 127101 CAAAAATCTGCATGGC 127116 || || |||||||| Sbjct 7187 TGAAGATTTGCATGGC 7202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475491046289840