Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1241 98.7 9e-16 seq579 98.7 9e-16 seq806 86.0 6e-12 >seq1241 Length=2680 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||| |||||||| || || ||||| ||||| || || ||| Sbjct 2382 ATACCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 2441 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || || |||| || || || ||| | |||| || ||||||||||| Sbjct 2442 CTCAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGA 2501 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || |||| || | || | ||||| || ||||| Sbjct 2502 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTCTCAATCGTGTCCGAGGACTC 2560 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || |||| ||| ||||| || || || || || || | ||||| Sbjct 2561 GACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | || ||| || || ||||| || ||||| ||||| || || ||||| Sbjct 2157 CCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2216 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| || | || || || || | |||| || ||||||||||||||| Sbjct 2217 AGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 2276 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || || || || || |||| || | || | ||||| || |||||||| Sbjct 2277 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTCTCAATCGTGTCCGAGGACTCGAC 2335 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| ||| ||||| || || || || || || | ||||| Sbjct 2336 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 >seq579 Length=16948 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || ||| || |||||||| || ||||| ||||| || || ||||| Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || |||| || || || ||| | |||| || ||||||||||| ||| Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || || || || || | || | |||||||||||||| || Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACC 1748 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | ||| ||||| || || || || || || | |||||| Sbjct 1749 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq806 Length=9869 Score = 86.0 bits (94), Expect = 6e-12 Identities = 209/315 (66%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 124004 CGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGC 124063 ||| || || || ||| ||| ||||| |||||| |||||| | | ||| | Sbjct 7035 CGAGACCATCTACCACGCCGCGGTGGAGCGCTCCTGCGAGCTTGCGGAGCAGGAGGGCAC 7094 Query 124064 GTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAA 124123 ||||| | |||| |||| ||| ||||||| || | | ||||||||| | ||| Sbjct 7095 CTACGAGACCTACGAGGGCTCCCCCGCGAGCCAGGGCCTGCTCCAGTACGACCTCTGGGG 7154 Query 124124 TGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAA--CAACGCATATCGACGCAC 124181 || || || | | ||||||||| | | || ||| | | | | |||| Sbjct 7155 CCGCACGCCCACCGACCTCTGGGACTGGGACTCGCTCAAGGCCAAGG--TGGCCAAGCAC 7212 Query 124182 GGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTA 124241 || |||| ||||||||| || | ||| |||||| |||||| |||| || || | Sbjct 7213 GGCCTGCGCAACTCGCTGCTGCTCGCGCCCATGCCCACGGCATCCACGAGCCAGATCCTC 7272 Query 124242 GGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCC 124301 || |||||| | ||||||||||| ||| | ||| | ||| |||| || ||| | ||| Sbjct 7273 GGCTTCAACGAGTGCTTCGAGCCGTACACGAGCAACATCTACATGCGCCGTGTGCTCGCC 7332 Query 124302 GGCGATTTTCAAGTG 124316 ||||| || || ||| Sbjct 7333 GGCGAGTTCCAGGTG 7347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993928284360