Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq579 132 1e-25 seq1241 122 2e-22 seq824 111 4e-19 seq708 107 5e-18 >seq579 Length=16948 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || ||||||||||| |||| ||||||||| || || Sbjct 1575 CGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 1634 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || ||||||||||| ||||||||||| |||||||||||||||||| ||| || Sbjct 1635 CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCC 1694 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| || | ||||| | | || || || | Sbjct 1695 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGG 1754 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || || || || || | ||| Sbjct 1755 GTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTG 1792 >seq1241 Length=2680 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| ||||||||||| |||| ||||||||| || || Sbjct 2163 CGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 2222 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||| ||||| || |||||||||||||| ||| || Sbjct 2223 CGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCC 2282 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | ||||| | | || || |||| Sbjct 2283 TCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGG 2342 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAA 199620 || |||||||| || ||||| || || || || Sbjct 2343 GTAATCGTCTTGCCAGTGAGCGTCTTGACGAA 2374 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || ||||||||||| |||| ||||||||| || || | || ||| Sbjct 2400 AGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCT 2459 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||| || || ||||||||||||||| ||| || || ||| Sbjct 2460 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 2519 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | || || |||| || |||||| Sbjct 2520 TGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTC 2579 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || || ||||| || || || || Sbjct 2580 TTGCCAGTGAGCGTCTTGACGAA 2602 >seq824 Length=8870 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || |||||| |||| ||||||||| | || | || || Sbjct 6988 AGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 7047 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||||||| || || || ||| Sbjct 7048 TCGAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 7107 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || | ||| ||||||| |||| ||||| | | || || |||| |||||||||| Sbjct 7108 TGGACCTTGGACTTCACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTC 7167 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | || ||||| Sbjct 7168 TTGCCAGTAAGAGTCTTGATGAAGATTTG 7196 >seq708 Length=14709 Score = 107 bits (118), Expect = 5e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || ||||||||||| |||||||||| || || | ||||| Sbjct 8999 AGCACGAGGTGCAGCGTGCTCTCCTTTTGGATGTTGTAGTCACTCAGCGTGCGGCCATCC 8940 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||| |||||||||||||||||||| || || || ||| Sbjct 8939 TCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 8880 Query 199538 TGAATCTTTTGCTTCAC 199554 |||||||| |||||| Sbjct 8879 TGAATCTTGGACTTCAC 8863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178896812804947