Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq829 430 1e-115 seq579 156 4e-33 seq1241 140 3e-28 seq824 120 3e-22 seq708 109 5e-19 >seq829 Length=8684 Score = 430 bits (476), Expect = 1e-115 Identities = 641/892 (72%), Gaps = 17/892 (2%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| || || || | || |||| || ||| ||| | ||| || || |||||||||| Sbjct 5798 CTCGAAGAAGTTCGACTTGCCCTGCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGT 5739 Query 132687 TGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGAT 132746 | |||||||| ||||| | | ||| | || || || | ||| ||||| ||||| || Sbjct 5738 CGCGTTGTAGTACTTGGGGTTGCCCAGCGCCACCAGGAGGCGGTCCGCCACAAACTCAAT 5679 Query 132747 GTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA 132805 ||| || ||||| | ||| | | | || | ||| ||| |||||||| ||||||| Sbjct 5678 GTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGCCACGGGCAGCGCATCGGTGA 5620 Query 132806 GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCG 132865 | ||| | |||||| | || || ||||||| ||| | | || || || | | | Sbjct 5619 GGAAGTCCTTCTCGATCGACACGGCCTCGGTGATGATCTTCTCCAC-CGTCTCGGGGTGG 5561 Query 132866 GC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCC 132924 || || | | | || |||||| | ||| ||||||||| |||| ||||||||| Sbjct 5560 GCGCGCTTCTTGAGGTGGCTGAACAGGAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCA 5501 Query 132925 CTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAA 132984 | || ||||| |||||| ||| | | |||||||| ||||| || || |||||||| Sbjct 5500 CGCGAGATGAGCTCGTTGGAGAAGGAGAGACCGGGCATCAGGCCACGCTTCTTGAGCCAG 5441 Query 132985 AATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGG 133044 || |||| ||||| |||||| ||||||| |||||| || || ||||| ||||||||| Sbjct 5440 AAGATGGACGCGAAGGAGCCCGAGAAGAAGATGCCCTCCACCGCGGCGAACGCCACCAGG 5381 Query 133045 CGCTCGCCGAACGTGGCTTCTTTGCTGGC-GATCCAGCGCAGCGCCCATTCGGCCTTTTC 133103 |||||| | || |||| | | | || |||||||||||||||||| |||||||| Sbjct 5380 CGCTCGGCAAAGATGGCA-CGGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTGCG 5322 Query 133104 TTTGACGCACGGC-ATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC 133162 || || ||||| || || ||||| ||| ||| | | | ||| | || | || | Sbjct 5321 CTTCAC-CACGGGGATGGTCTCGATCGCGC-CAA-AGAGGAAGTCGCGCTGCTCGGGCTC 5265 Query 133163 GC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 || | |||||||||||| || ||| || | |||||||| | ||||||||| ||| Sbjct 5264 GCGGATGTAGGTGTCGATCAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGAT 5205 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGA 133279 || |||||||| ||||| ||||||||| | ||||||| || | || ||| ||||| | Sbjct 5204 CTGGAAGCCGTAGAAGCAGCGCGCCTCGGCGGCCTGCACCTCG-GCGCTGAACCGCTCCA 5146 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 |||| || ||||| || |||||||| |||||| || ||||| ||||| || |||||| Sbjct 5145 CCAGGTTCTCGTTCACAATGCCGTCCGAGGCGGCAAAGAAGGCGAGCACATGGCTGATGA 5086 Query 133340 AATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | || |||||||||||||||| || | ||||||||| | ||||||||||||||| | Sbjct 5085 AGTGCCGCTCGTTGTCGTTCAGGCGGTGGTCCCAGTCGTACAGGTCCTTGGACAGGTCGA 5026 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAAT 133456 ||||||| ||||||| || ||||||||| || |||||||| ||| || || Sbjct 5025 TCTCCTCGGCGGTCCAGAAGGACGCCTCGTGCTTCTTGTACATCTGCCAGATCTCGTGGA 4966 Query 133457 ATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 | | ||||| || | ||| |||||||| | | | ||| || ||||||||| Sbjct 4965 AGCGGATGGGGAACAGCACGAACCGGCGCGAGGTCTCGACCAGCAGCGGCTC 4914 >seq579 Length=16948 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || |||||||| || |||||| |||| || ||| | || Sbjct 1795 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCC 1736 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1735 GACACGATTGAGAATG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1677 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 1676 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAA 1617 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| ||||||||||| || | || || Sbjct 1616 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 1569 >seq1241 Length=2680 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| | ||||| || |||||||| ||||| || || ||| | || |||||| || | Sbjct 2611 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2552 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || || |||| ||||| ||||| ||||| | ||||| Sbjct 2551 GACACGATTGAGAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 2493 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||| ||||| |||||||| |||| || || || | ||||||||| Sbjct 2492 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAA 2433 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| |||||| | ||||| || Sbjct 2432 CATCCAGAAGGAGTCGACCCTGCATCTCGTGCTCCG 2397 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| | ||||| || |||||||| ||||| || || ||| | || |||||| || | Sbjct 2383 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2324 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || || |||| ||||| ||||| ||||| | ||||| Sbjct 2323 GACACGATTGAGAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCA 2265 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| ||||| || || | ||||| || | ||||||||| Sbjct 2264 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAA 2205 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||||||| || |||||||||| || | ||||| Sbjct 2204 CATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTGCGCGGCGG 2157 >seq824 Length=8870 Score = 120 bits (132), Expect = 3e-22 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||| | || || || || ||||| || ||||| | || |||||| | | | Sbjct 7199 ATGCAAATCTTCATCAAGACTCTTACTGGCAAGACGATCACGCTGGAGGTCGAGTCGAAC 7140 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAA-TCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | ||| || ||| ||||| ||||| || || | ||||| Sbjct 7139 GACA-CGATCGACATCGTGAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCTCCGGACCA 7081 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||||||||| ||||| || |||| |||||||||| ||||||||| Sbjct 7080 GCAGCGGTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAA 7021 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||| ||||| || | ||||| || Sbjct 7020 CATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTTCG 6985 >seq708 Length=14709 Score = 109 bits (120), Expect = 5e-19 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCG-ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 ||||| ||||| || ||||||| |||| ||||| ||||||| ||| ||||| |||||||| Sbjct 8881 GACAAGGAGGGCAT-CCCGCCGGACCAGCAGCGTCTCATTTTCGCCGGCAAGCAGCTGGA 8939 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGC 38454 || | ||||| || | |||||||||||||||||||| ||| |||||||| | |||| Sbjct 8940 GGATGGCCGCACGCTGAGTGACTACAACATCCAAAAGGAGAGC-ACGCTGCACCTCGTGC 8998 Query 38455 TGCGTTTGAGAGGCGG 38470 | || || | ||||| Sbjct 8999 TCCGCCTGCGTGGCGG 9014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500162540205440