Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq884 176 4e-39 >seq884 Length=6993 Score = 176 bits (194), Expect = 4e-39 Identities = 307/449 (68%), Gaps = 26/449 (6%) Strand=Plus/Minus Query 29789 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGG---- 29844 ||||||| ||| ||||| || | ||| |||||||| ||||| ||||| |||| Sbjct 1729 CGAGCTGCTTCTGGAGCGGCTCGATGTGGTCCAGGTACACGTGTGCGTCGCCCATCACCA 1670 Query 29845 GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGA 29904 | ||| | ||| | | || ||||| || | || | |||| ||||| || Sbjct 1669 GCGTG----AGCTCCGCGGCCTCACAGCCGGTAACCTCGGCGAGGATGTGGGTGAGCAGT 1614 Query 29905 GAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGC 29964 | |||||| || ||||| |||||||| ||||| |||| ||| | ||||| |||||| | | Sbjct 1613 GCGTAGCTTGCAATGTTGAAGGGTACACCGAGGCCCAGGTCACACGACCGCTGGTACATC 1554 Query 29965 TGACACGAGAGCT---------CTCCGTCGCT---------CACGTAAAACTGACACATG 30006 || ||| ||||| | ||| ||| |||||| |||||||||| | Sbjct 1553 TGGCACTTGAGCTGCGGACGCGCGCCGCCGCCGGGCAGTGACACGTAGAACTGACACAGG 1494 Query 30007 GTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATG 30066 |||||||||| || || ||||| | || |||| |||||||| |||| | | | Sbjct 1493 ATGTGGCACGGCGGCAGCGCCATCTTGTGCAGGTCTGCCGGGTTCCACGCGCTGAGCAGG 1434 Query 30067 ATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACC 30126 ||||||| ||| ||||| || |||| | || | | | | ||||| ||||| Sbjct 1433 ATGCGCCGGTCCGTCGGGTTTGTCTTGATCTGCTCAATCACCTGTGCGAGCTGGTCCACG 1374 Query 30127 CCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGG 30186 ||| |||| ||||||||| | || ||||||| ||| || || || | ||||||| Sbjct 1373 CCCTGGCCCGTGTAGTCTGCGTCCGCGTTGGTGTACTGTGCCCCAAAGTGGCGCCACTGG 1314 Query 30187 AACCCGTACACCGGTCCCAGGTCTCCCTC 30215 ||||||||||| || |||||||| ||||| Sbjct 1313 AACCCGTACACGGGCCCCAGGTCGCCCTC 1285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408609427775693