Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq579 87.8 1e-12 seq708 82.4 6e-11 >seq579 Length=16948 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || ||||| ||| || || || ||||| || || | || Sbjct 1578 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGG 1637 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| ||||| || ||||| ||||| || |||| |||| ||||||| Sbjct 1638 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCC 1697 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||| | || Sbjct 1698 TTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTG 1757 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 ||||| || ||||||| || || || || | ||||| || Sbjct 1758 ATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATGGT 1798 >seq708 Length=14709 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||| | || ||||||||||| ||||| || ||||| ||| Sbjct 9014 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTGCTCTCCTTTTGGATGTTGTAGTCACTC 8955 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| ||||| || || || ||||| || |||| || Sbjct 8954 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGCGGG 8895 Query 48660 ACGCCCTCCTTGTCGCTAATCTT 48682 | |||||||||||| |||||| Sbjct 8894 ATGCCCTCCTTGTCCTGAATCTT 8872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380929981367043