Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1241 104 2e-17 seq579 95.1 1e-14 >seq1241 Length=2680 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||| | || | || ||||| || || || || ||||| || || || || || | Sbjct 2383 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2324 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 2323 GACACGATTGAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCAG 2264 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| |||||| | | || || || ||| Sbjct 2263 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAAC 2204 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| ||||| |||| ||||||| || Sbjct 2203 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTGCGCGGCGG 2157 >seq579 Length=16948 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| | || | || || || || || || || || || ||||| || || | Sbjct 1798 ACCATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCT 1739 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || |||||||| ||||| || || || ||||| || Sbjct 1738 TCCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 1679 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| ||||||| ||||| || ||||||||||| | | || || || Sbjct 1678 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTAC 1619 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| || ||| ||||| |||| |||| || || Sbjct 1618 AACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 1569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888371475480