Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1241 114 8e-21 seq824 104 2e-17 seq579 100 2e-16 seq708 89.7 3e-13 >seq1241 Length=2680 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || |||| |||| Sbjct 2171 CAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 2230 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || |||||||| |||| | ||||||||||| Sbjct 2231 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCCTCCTTGTC 2290 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || || |||||| || | ||| || || Sbjct 2291 CTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGT 2350 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| ||||| || || | |||||| Sbjct 2351 CTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || | || | || ||||| ||||| |||||||| Sbjct 2420 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAA 2479 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 2480 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2539 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | ||| || ||||| || ||||| ||||| || Sbjct 2540 CTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGAC 2599 Query 34966 AAAGATCTGCAT 34977 || | |||||| Sbjct 2600 GAACACCTGCAT 2611 >seq824 Length=8870 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||||||||||||| ||||| ||||| ||| |||| | || Sbjct 6988 AGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 7047 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||||| || |||||||| | || | ||||||||||| Sbjct 7048 TCGAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 7107 Query 34886 TTTATTTTTTGTTTGACGGATG-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | | || || || |||| | |||| || || | |||||| || | || || || Sbjct 7108 TGGACCTTGGACTTCAC-GATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGT 7166 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || || ||||| | ||||| |||||| Sbjct 7167 CTTGCCAGTAAGAGTCTTGATGAAGATTTGCATG 7200 >seq579 Length=16948 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || |||| | || Sbjct 1583 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTC 1642 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 1643 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 1702 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || | ||| || || | ||| || Sbjct 1703 CTGGATCTTGGCCTTCAC--ATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 1760 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| |||||||| || || | |||||| Sbjct 1761 GTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATG 1796 >seq708 Length=14709 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||||||||||| || ||||| ||||| || |||| |||| Sbjct 8999 AGCACGAGGTGCAGCGTGCTCTCCTTTTGGATGTTGTAGTCACTCAGCGTGCGGCCATCC 8940 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||| || || || |||||||| |||| | ||||||||||| Sbjct 8939 TCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 8881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686286245779