Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq579 105 1e-17 seq1241 89.7 1e-12 >seq579 Length=16948 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || |||||| || | |||||| || || || ||||| || || || || Sbjct 1568 ACCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 1627 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | ||||| || || || || || || ||||| || | || || || ||||| Sbjct 1628 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 1687 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || || ||||| || || ||||| |||||||| || || || || Sbjct 1688 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCAC 1747 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||| |||| ||||| || || | ||||| Sbjct 1748 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq1241 Length=2680 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||||| || | ||| || || || || ||||| || || || || Sbjct 2155 TACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 2214 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || |||||||| || | || || || || | Sbjct 2215 TCAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCG 2274 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| | || || || |||||||| || | || | Sbjct 2275 GAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGA 2334 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || ||||||||||| || | |||||| || || | |||||| Sbjct 2335 CCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || | ||||| || || || ||||| || || || || Sbjct 2383 TACCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGC 2442 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | |||||||| || || || || || || || || | || || || |||| Sbjct 2443 TCAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAG 2502 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| | || || || |||||||| || | || | Sbjct 2503 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGA 2562 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || ||||||||||| || | |||||| || || | |||||| Sbjct 2563 CCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981806556776299