Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq579 140 3e-28 seq824 136 4e-27 seq1241 107 2e-18 >seq579 Length=16948 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||| || |||||||| ||| | Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| ||||||||||| || || || |||| ||||||||||||| |||| Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||||| | | | | ||||||| || |||||| Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACC 1748 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||||| || ||||||| || || || || | ||||| Sbjct 1749 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq824 Length=8870 Score = 136 bits (150), Expect = 4e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||| || |||||||| ||| | ||| || |||| || |||||||| || Sbjct 7002 CGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 7061 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||| || ||||||||||||||||||| ||| | | |||||||||| || ||| ||| Sbjct 7062 CGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGACCTTGGACTT 7121 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 || | | | ||||||| |||| || ||||||| ||||||||| || || || | ||| Sbjct 7122 CACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTTGCCAGTAAGAGT 7181 Query 35719 TTTCACAAATATCTGCAT 35736 || | || || ||||| Sbjct 7182 CTTGATGAAGATTTGCAT 7199 >seq1241 Length=2680 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || || || |||| ||||||||||| || || || Sbjct 2420 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAA 2479 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| ||||| || |||||||||| |||||| ||| | | Sbjct 2480 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2539 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| || ||||| || || || | || || || Sbjct 2540 CTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGAC 2599 Query 35725 AAATATCTGCAT 35736 || | |||||| Sbjct 2600 GAACACCTGCAT 2611 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| || |||||||| ||| || || || | || Sbjct 2171 CAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 2230 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || ||||| |||| ||||||||||||| |||| | ||||||||| Sbjct 2231 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCCTCCTTGTC 2290 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||| | | | | |||||| || || ||||||| || ||||| Sbjct 2291 CTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGT 2350 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | || || || || | |||||| Sbjct 2351 CTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450784353096280