Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11]
1,641 sequences; 8,425,902 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq579 140 3e-28
seq824 136 4e-27
seq1241 107 2e-18
>seq579
Length=16948
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| || | ||| |||||| || |||||||| ||| |
Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| ||||||||||| || || || |||| ||||||||||||| ||||
Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||||| | | | | ||||||| || ||||||
Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACC 1748
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | |||||||| || ||||||| || || || || | |||||
Sbjct 1749 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795
>seq824
Length=8870
Score = 136 bits (150), Expect = 4e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598
||| |||||||| || |||||||| ||| | ||| || |||| || |||||||| ||
Sbjct 7002 CGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 7061
Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658
||| || ||||||||||||||||||| ||| | | |||||||||| || ||| |||
Sbjct 7062 CGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGACCTTGGACTT 7121
Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
|| | | | ||||||| |||| || ||||||| ||||||||| || || || | |||
Sbjct 7122 CACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTTGCCAGTAAGAGT 7181
Query 35719 TTTCACAAATATCTGCAT 35736
|| | || || |||||
Sbjct 7182 CTTGATGAAGATTTGCAT 7199
>seq1241
Length=2680
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||| || || || |||| ||||||||||| || || ||
Sbjct 2420 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAA 2479
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||||| ||||| || |||||||||| |||||| ||| | |
Sbjct 2480 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2539
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||||| || ||||| || || || | || || ||
Sbjct 2540 CTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGAC 2599
Query 35725 AAATATCTGCAT 35736
|| | ||||||
Sbjct 2600 GAACACCTGCAT 2611
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| ||||| || | ||| |||||| || |||||||| ||| || || || | ||
Sbjct 2171 CAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 2230
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| |||||||| || ||||| |||| ||||||||||||| |||| | |||||||||
Sbjct 2231 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCCTCCTTGTC 2290
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | | | |||||| || || ||||||| || |||||
Sbjct 2291 CTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGT 2350
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || | || || || || | ||||||
Sbjct 2351 CTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450784353096280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |