Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq806 156 4e-33 seq579 118 1e-21 seq829 109 6e-19 seq1241 105 7e-18 seq824 104 2e-17 seq708 93.3 4e-14 >seq806 Length=9869 Score = 156 bits (172), Expect = 4e-33 Identities = 294/426 (69%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||||| |||| |||||||||||||| |||||||| ||||| |||||||| | Sbjct 5935 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCGAGGACATCGACGCCGCGATC 5994 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | ||||| ||| ||| || ||||| |||||||| |||| | Sbjct 5995 GAGACGTACAACTACATGTCCGAGAAGGCGTTCACCCACGCCTCGCCCACGCTGTTCAAC 6054 Query 7684 GCGGGCA---CAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740 || |||| | ||| || || |||| ||||| || || | | |||| || ||| Sbjct 6055 GCCGGCACGCCGAAC---CCGCAGATGTCGTCGTGCTTCCTGGTGAGCATGAAGGACGAC 6111 Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGC 7800 ||||| ||||| ||| | ||||| ||||||| || ||| || ||| Sbjct 6112 TCGATCGAGGGCATCTACGAGACGCTCAAGTCCTGCGCCATGATCAGCAAGACCGCTGGC 6171 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGC-CG--CATCGTGTCCACC 7857 || || ||||||||| | || | | |||||| |||| || || ||| | | |||| Sbjct 6172 GGTATTGGTCTGAACATCCACTGCATCCGCGCC-ACGG--GCTCGTACATTGCGGGCACC 6228 Query 7858 AACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACAT 7917 ||||| || ||| | | ||||||| | || |||| ||| ||| ||| ||| | Sbjct 6229 AACGGGTTCAGCAACGGCATTGTGCCCATGCTCCGTGTGTACAACAACACGGCGCGCTAC 6288 Query 7918 GTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCAC 7974 || |||||||| || |||||| ||||| |||||||| |||||||||||||| Sbjct 6289 GTGGACCAGGGCGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTGGAGCCGTGGCAC 6348 Query 7975 GCGGAC 7980 ||||| Sbjct 6349 TCGGAC 6354 >seq579 Length=16948 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||||| | ||| | Sbjct 1578 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGG 1637 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || || |||| ||||||||| || || || ||||| || Sbjct 1638 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCC 1697 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||||| || ||||| ||||| || Sbjct 1698 TTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTG 1757 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| | |||||| Sbjct 1758 ATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq829 Length=8684 Score = 109 bits (120), Expect = 6e-19 Identities = 227/333 (68%), Gaps = 15/333 (5%) Strand=Plus/Minus Query 21544 CGATCCGCCACGAATTCAATGTATTGACACATGCTGT-CGCAATTCATGCCCAACAGATC 21602 || |||||||| || |||||||| || |||||| | ||| |||||||| | ||| | Sbjct 5698 CGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCG-TTCATGCCGATCAGCGC 5640 Query 21603 GACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCATGGC 21662 || || ||||| ||||||| || ||||||||||| | ||| || || |||| || Sbjct 5639 CACGGGCAGCGCATCGGTGAGGAAGTCCTTCTCGATCGACACGGCCTCGGTGATGATCTT 5580 Query 21663 GTGTATT-TCACCGGC-GGACAATTTGTCTTGAGGCTCGATGTATTTGTTGTAGTAGAGA 21720 | | || | || || | | |||||||| | | || | ||| Sbjct 5579 CTCCACCGTCTCGGGGTGGGCGCGCT-TCTTGAGG----------TGGCTGAACAGGAGG 5531 Query 21721 CAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGA 21780 || ||||| | |||||||| |||||||| ||||| || | |||||| ||| | |||| Sbjct 5530 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGAGAGA 5471 Query 21781 CCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaaaaC 21840 |||||||| | || || || || | | || || | ||| ||| || || || || Sbjct 5470 CCGGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCCGAGAAGAAG 5411 Query 21841 ACGCCCTCCACAATGGCGAACGCCACCATGCGC 21873 | ||||||||| |||||||||||||| |||| Sbjct 5410 ATGCCCTCCACCGCGGCGAACGCCACCAGGCGC 5378 >seq1241 Length=2680 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||||| | ||| | Sbjct 2166 AGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGG 2225 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| ||||| |||| |||||||| || ||||| || || || Sbjct 2226 CCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCCTCC 2285 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | ||||| || || || || || || ||| Sbjct 2286 TTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTA 2345 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| | ||||| Sbjct 2346 ATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | |||||| || || || || ||||| || ||||||||||||| | || | Sbjct 2394 AGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGG 2453 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || ||||||| |||||||| || || || ||||| || Sbjct 2454 CCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCC 2513 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | ||||| || || || || || || ||| Sbjct 2514 TTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTA 2573 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| | ||||| Sbjct 2574 ATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 >seq824 Length=8870 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| |||||| ||||| || ||||||||||||| | |||| | ||| || Sbjct 6990 CACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 7049 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| ||||| || || ||||| |||||||| || || || || || || || || || Sbjct 7050 GAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 7109 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 | || || || ||| | |||||| ||| || || || || || || || || Sbjct 7110 GACCTTGGACTTCACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTT 7169 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || | ||| |||||||| Sbjct 7170 GCCAGTAAGAGTCTTGATGAAGATTTGCAT 7199 >seq708 Length=14709 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| |||||| |||||||| ||||||||||| | | ||| | Sbjct 9005 AGGCGGAGCACGAGGTGCAGCGTGCTCTCCTTTTGGATGTTGTAGTCACTCAGCGTGCGG 8946 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | ||||||||| || ||||| ||||| || Sbjct 8945 CCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGCGGGATGCCCTCC 8886 Query 134616 TTTTCTTGAATTTT 134629 || || ||||| || Sbjct 8885 TTGTCCTGAATCTT 8872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388033015320