Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq579 104 2e-17 seq1241 96.9 3e-15 seq824 89.7 4e-13 >seq579 Length=16948 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| |||| || | ||| || || || || || |||||||||||| Sbjct 1569 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1628 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| || ||||| || |||||| | || |||||||| || ||||| || Sbjct 1629 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGA 1688 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| |||| | || | ||||| | | || || Sbjct 1689 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACC 1748 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||||||||| || || || || | |||||| Sbjct 1749 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq1241 Length=2680 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || ||||||| |||| |||| || | ||| || || || || || ||||||||| Sbjct 2154 TTACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 2213 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 |||| |||| | || || ||||| || ||||| | || || ||||| || |||||| Sbjct 2214 CTCAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGC 2273 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||| || || ||||||| || | | | || | ||||| | || || Sbjct 2274 GGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCG 2333 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || | ||||| || || || || || || | |||||| Sbjct 2334 ACCTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCATA 2384 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | || | ||| | || || || || || || |||||||||||| Sbjct 2385 CCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2444 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||| ||||| || |||||| |||| || ||||| || ||||| || Sbjct 2445 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 2504 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | || || || Sbjct 2505 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACC 2564 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || || | |||||| Sbjct 2565 TCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCATA 2612 >seq824 Length=8870 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | | |||| |||| |||||||| || || ||| | Sbjct 7009 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAG 7068 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||| || ||||| || | |||||| || || || |||| |||| | | Sbjct 7069 ATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGACCTTGGACTTCACGATG 7128 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | ||||| || ||||| || | Sbjct 7129 TCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTTGCCAGTAAGAGTCTTGATG 7188 Query 27237 AAGATTTGCATAGC 27250 ||||||||||| || Sbjct 7189 AAGATTTGCATGGC 7202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925901444792