Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq829 129 7e-25 seq1061 89.7 6e-13 >seq829 Length=8684 Score = 129 bits (142), Expect = 7e-25 Identities = 126/160 (79%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 |||||| ||||| || | || || || || ||||| ||||||||||| || ||||| Sbjct 5369 CTTTGCCGAGCGCCTGGTGGCGTTCGCCGCGGTGGAGGGCATCTTCTTCTCGGGCTCCTT 5428 Query 94857 CTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | ||| | || | |||||||||||||| || || ||||| ||||||| ||||||||||| Sbjct 5429 C-GCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCCGGTCTCTCCTTCTCCAACG 5487 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||||| ||||||||||| || ||| || ||||| Sbjct 5488 AGCTCATCTCGCGTGACGAGGGCCTGCACACCGACTTTGC 5527 >seq1061 Length=4129 Score = 89.7 bits (98), Expect = 6e-13 Identities = 204/300 (68%), Gaps = 14/300 (5%) Strand=Plus/Minus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || || ||||||||||| || ||||| || || ||||||||||| || Sbjct 2057 TTGATGATCAGGCCCTTGATGTGCGACCCGTCAAAGTCCTGGTCGGTCATGATCATCAGG 1998 Query 169220 CGACCATACCGAAG---CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAG 169276 | || ||||| || |||| | || | ||| || | ||| || || || || || | Sbjct 1997 CTGCCGTACCGCAGGCCCTCG-ACAC-TGTTG-TACTGCTTCCCGTGCTGCAGGCCGAGA 1941 Query 169277 ATCTTCTTGAGATCGTTGAACTCTTGGTT--TGATGT--GAGCTGTGTGACAGAGGCATC 169332 |||| ||||| | |||| ||| ||| | ||| ||| ||| | | || || Sbjct 1940 ATCTCCTTGATGTTCTTGATCTCGGTGTTCTTCATGATCGAGTCGTGCGTC----GCCTC 1885 Query 169333 GCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGAC 169392 || ||||| ||| ||||| || ||||| |||||||| ||||| || || | Sbjct 1884 ACGCACATTGAGCAGCTTACCACGCAGCGGGAACACACCGTACGCGTCACGGCCCACCTC 1825 Query 169393 GGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 ||||| | || ||||| | ||| ||||||||||||||||||| ||| |||||||| Sbjct 1824 ACTCAGACCGGACACGGCGAGCGCCTTGGCCGAGTCACCCTCGGTGAGGATCAGCGTACA 1765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248835862840