Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq884 167 2e-36 >seq884 Length=6993 Score = 167 bits (184), Expect = 2e-36 Identities = 379/573 (66%), Gaps = 18/573 (3%) Strand=Plus/Minus Query 29862 CGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGT 29921 ||||||| ||| ||||| || | || |||||||| ||||| ||||| |||| Sbjct 1729 CGAGCTGCTTCTGGAGCGGCTCGATGTGGTCCAGGTACACGTGTGCGTCGCCCATCACCA 1670 Query 29922 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29981 | | ||| | | || ||||| || | || | |||| ||||| || | || Sbjct 1669 GCGTGAGCTCCGCGGCCTCACAGCCGGTAACCTCGGCGAGGATGTGGGTGAGCAGTGCGT 1610 Query 29982 AGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGAC 30041 |||| || ||||| |||||||| ||||| |||| ||| | ||||| |||||| | ||| | Sbjct 1609 AGCTTGCAATGTTGAAGGGTACACCGAGGCCCAGGTCACACGACCGCTGGTACATCTGGC 1550 Query 30042 ACGAGAGCT---------CTCCGTCGCT---------CACGTAAAACTGACACATGGCGT 30083 || ||||| | ||| ||| |||||| |||||||||| | || Sbjct 1549 ACTTGAGCTGCGGACGCGCGCCGCCGCCGGGCAGTGACACGTAGAACTGACACAGGATGT 1490 Query 30084 GGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGC 30143 ||||||| || || ||||| | || |||| |||||||| |||| | | ||||| Sbjct 1489 GGCACGGCGGCAGCGCCATCTTGTGCAGGTCTGCCGGGTTCCACGCGCTGAGCAGGATGC 1430 Query 30144 GCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCA 30203 ||| ||| ||||| || |||| | || | | | | ||||| ||||| ||| Sbjct 1429 GCCGGTCCGTCGGGTTTGTCTTGATCTGCTCAATCACCTGTGCGAGCTGGTCCACGCCCT 1370 Query 30204 TCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACC 30263 |||| ||||||||| | || ||||||| ||| || || || | ||||||||||| Sbjct 1369 GGCCCGTGTAGTCTGCGTCCGCGTTGGTGTACTGTGCCCCAAAGTGGCGCCACTGGAACC 1310 Query 30264 CGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGT 30323 ||||||| || |||||||| ||||| | | | || || | | || || | Sbjct 1309 CGTACACGGGCCCCAGGTCGCCCTCGCGTCGCTCCGTGAGCCCGCGGGAGCGCAGGAACT 1250 Query 30324 CTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTG 30383 | || ||||| |||||||||| | || | ||| ||||| || |||| | Sbjct 1249 CGAGCGAGCCGTTTCCGTCCCAGATGTGCACGTCGCGTGCAGCGAGCTGCTTCGAGTCCG 1190 Query 30384 TGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 | || | || |||||||||||||||||||| Sbjct 1189 TCTTACCCCCGATGAACCACAGCAGCTCCTCCA 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406302273918972