Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1241 98.7 6e-16 >seq1241 Length=2680 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || |||| ||||| ||||| || |||||| || ||||| || || Sbjct 2157 CCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2216 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 2217 AGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 2276 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | ||| ||||| | ||| || Sbjct 2277 ATACCCTCCTTGTCCTGGATC-TTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGAC 2335 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| ||||| || || || | ||| || || || | |||||| Sbjct 2336 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||| | ||| || || |||||| || ||||| || || || || || Sbjct 2394 AGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGG 2453 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || ||||| || || | ||||| |||||||| || | |||||| Sbjct 2454 CCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCC 2513 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| ||||| | ||| || |||| ||| Sbjct 2514 TTGTCCTGGATC-TTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGT 2572 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || | ||| || || || | |||||| Sbjct 2573 AATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723305506353