Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq579 120 3e-22 seq1241 113 4e-20 >seq579 Length=16948 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 ||||||| | || || || || ||||| |||||| | || || || || ||||| | | Sbjct 1797 CCATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCTT 1738 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| ||||||||| || || || || || ||||| || ||||| || || || | Sbjct 1737 CCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1678 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | |||||| | || | ||||||||| || |||| ||| | || | ||| |||| Sbjct 1677 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACA 1618 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||| || ||||||||||| | || |||| ||||| |||| ||||| Sbjct 1617 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 1569 >seq1241 Length=2680 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || |||||| | ||||| || || || || | || Sbjct 2611 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2552 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| ||||| || || || ||||| || ||||| || || || || Sbjct 2551 GACACGATTGAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 2492 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||||||| | || | ||| |||||| Sbjct 2491 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAAC 2432 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | ||| | || | || |||| ||||| || Sbjct 2431 ATCCAGAAGGAGTCGACCCTGCATCTCGTGCTCCGCCTGCGCGGTGGTAT 2382 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || |||||| | ||||| || || || || | || Sbjct 2383 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCG 2324 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| ||||| || || || ||||| || || || || || || || Sbjct 2323 GACACGATTGAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCAG 2264 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || | || || | || | ||| |||||| Sbjct 2263 CAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAAC 2204 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||| |||| |||| || || Sbjct 2203 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTGCGCGGCGG 2157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434909478736320