Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq824 87.8 2e-12 seq579 86.0 5e-12 >seq824 Length=8870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||||||||| || || || || || ||| || || || |||| || ||||| Sbjct 6997 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGC 7056 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || | ||||||||||| | || | | ||| |||||| || || Sbjct 7057 TTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGACCTTG 7116 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | ||| ||| ||||||| || |||| |||||| | || || || Sbjct 7117 GACTTCACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATCGTCTTGCCAGTA 7176 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || | ||||||||||| Sbjct 7177 AGAGTCTTGATGAAGATTTGCAT 7199 >seq579 Length=16948 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||| ||| || || || || || ||| || || || |||| || Sbjct 1586 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTC 1645 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | || | || ||| |||||| Sbjct 1646 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1705 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || || | || | | ||| ||| |||||||| || | ||||| | || Sbjct 1706 GATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 1765 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || || | |||||| Sbjct 1766 GCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429537009222233