Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1241 109 1e-18 seq579 98.7 2e-15 >seq1241 Length=2680 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| || || ||||| || ||||||||||| ||| | || | || || Sbjct 2399 GAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTC 2458 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || |||||||| || || | ||||||||||| | || || ||||| || Sbjct 2459 TTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 2518 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| |||| | |||| || ||| || || || ||||| || Sbjct 2519 CTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGT 2578 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||| |||||||| Sbjct 2579 CTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| ||| | || | ||||| Sbjct 2172 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 2231 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||||||||||| || || || ||||| || Sbjct 2232 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATACCCTCCTTGTCC 2291 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| |||| | |||| || ||| || || || ||||| || Sbjct 2292 TGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCCAGGGTAATCGTC 2351 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||| |||||||| Sbjct 2352 TTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 >seq579 Length=16948 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| ||| | || | || || Sbjct 1584 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 1643 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | || || ||||| || Sbjct 1644 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 1703 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | |||| ||| ||| || || || || || || Sbjct 1704 TGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 1763 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||| ||||| || ||||| Sbjct 1764 TTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153796540557111