Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1241 178 3e-39 seq579 178 3e-39 seq824 145 2e-29 seq708 129 1e-24 seq1061 95.1 3e-14 >seq1241 Length=2680 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| || ||||| || | ||| || || |||||||||||||| Sbjct 2156 ACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 2215 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||||||||||| || || ||||| ||| Sbjct 2216 CAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 2275 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | || || |||||||| | ||||| Sbjct 2276 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGAC 2335 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | ||||| ||||| | |||||| Sbjct 2336 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2383 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || || ||||| | || || || |||||||||||||| Sbjct 2384 ACCACCGCGCAGGCGGAGCACGAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 2443 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||| || || || || || ||||| || |||| || || ||||| || Sbjct 2444 CAGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGG 2503 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | || || |||||||| | ||||| Sbjct 2504 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTCTCAATCGTGTCCGAGGACTCGAC 2563 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | ||||| ||||| | |||||| Sbjct 2564 CTCCAGGGTAATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2611 >seq579 Length=16948 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || ||||| || | ||| || || |||||||||||||| Sbjct 1568 ACCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 1627 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || ||||| ||||||| ||| || ||||| || Sbjct 1628 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGG 1687 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || | || || ||||| |||| || || Sbjct 1688 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAAGACTCCAC 1747 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| ||||| ||||| | ||||| Sbjct 1748 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 1795 >seq824 Length=8870 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | |||||| || || |||||||||||||| || |||||||| Sbjct 6985 CGAAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCG 7044 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || |||||||| || || ||||| || |||||||||||| Sbjct 7045 TCCTCGAGCTGCTTGCCCGCGAAGATCAACCGCTGCTGGTCCGGAGGGATACCCTCCTTG 7104 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||| ||| | || ||| | ||||| ||||| | ||||| || || |||||| Sbjct 7105 TCCTGGACCTTGGACTTCACGATGTCGATCGTGTCGTTCGACTCGACCTCCAGCGTGATC 7164 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | |||||| | ||| || ||||| Sbjct 7165 GTCTTGCCAGTAAGAGTCTTGATGAAGATTTGCAT 7199 >seq708 Length=14709 Score = 129 bits (142), Expect = 1e-24 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||||||||| || || || || | |||||| || |||||||||||||||||| Sbjct 9015 ACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTGCTCTCCTTTTGGATGTTGTAGTCACT 8956 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||| || || | ||| || ||||| ||| Sbjct 8955 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCCGGCGG 8896 Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015 || ||||||||||| || ||||| Sbjct 8895 GATGCCCTCCTTGTCCTGAATCTT 8872 >seq1061 Length=4129 Score = 95.1 bits (104), Expect = 3e-14 Identities = 194/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCT-TGCAGCCTCGAACCAAACTG 273838 ||||||||||| | ||| || ||| ||||||||| || ||| || || ||| ||||| Sbjct 2783 GTGAAAATGTAACGGGCGCTGGCAGCGTCCTTGCCGCCCATGCTGCG-CGTACCGAACTG 2725 Query 273839 ACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCAC 273898 ||| | |||| ||| ||| | ||||||||| ||| | | ||||| || | || Sbjct 2724 ACCGTTCGGCATGAGCAGGTTCACGTTGTTGCTCCCGCAGAAGTCCTGCGCAAGGCCGAC 2665 Query 273899 GATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACC 273958 || ||| |||| ||||||||||| || || |||| || | | ||||| Sbjct 2664 AATCGTCATGGTAAGGCTCTGGTCGCCGTGGTGGTACGCCGTGTGCTCCGACACGTAACC 2605 Query 273959 ACTG-AACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAACA 274017 ||| | ||| || ||||| | ||| || || ||| |||||||| | | | | || Sbjct 2604 -CTGCAGCTGCGCGACCTTGATCTCGGTCCGCAGGTTGCGCTTGAAGCAGCCAAATAGCA 2546 Query 274018 CCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAAT 274060 |||| ||||| |||||||| ||||| || ||||| || || Sbjct 2545 CCTTGCGCTGACCGGGCTTGAGGCCATCCACCACCGAGGGGAT 2503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046717191981214