Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11]
1,641 sequences; 8,425,902 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1241 145 2e-29
seq579 138 3e-27
seq824 105 2e-17
seq708 86.0 2e-11
>seq1241
Length=2680
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || ||||| ||||| ||||| || ||| ||||| ||
Sbjct 2602 TTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCGGACACGATT 2543
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
||||||||||| ||||| |||||||| || || || |||||||||||||| || ||
Sbjct 2542 GAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTG 2483
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|| |||||||| || ||||| ||||| || | || || ||| || ||| |||| ||
Sbjct 2482 ATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAACATCCAGAAG 2423
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || |||||||| ||
Sbjct 2422 GAGTCGACCCTGCATCTCGT 2403
Score = 131 bits (144), Expect = 4e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || ||||| ||||| ||||| || ||| ||||| ||
Sbjct 2374 TTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCGGACACGATT 2315
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
||||||||||| ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 2314 GAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCAGCAGCGCCTG 2255
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||| ||||| || ||||| || ||||| | || || ||| || ||| |||| ||
Sbjct 2254 ATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAACATCCAGAAG 2195
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || || || || || ||
Sbjct 2194 GAGTCGACGCTCCACCTGGT 2175
>seq579
Length=16948
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||| | ||||| || || || || || || |||||||||||||||||||| || |||
Sbjct 1792 CAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGAC 1733
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || || ||||| |||||||| || || || ||||||||||||||
Sbjct 1732 ACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 1673
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||| || ||| ||
Sbjct 1672 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAACATC 1613
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 1612 CAGAAGGAGTCGACGCTGCACCTGGT 1587
>seq824
Length=8870
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||| | || ||||| || || || |||||||| || ||||| || |||
Sbjct 7196 CAAATCTTCATCAAGACTCTTACTGGCAAGACGATCACGCTGGAGGTCGAGTCGAACGAC 7137
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| | ||| || ||| | |||||||| || || |||||||||||||||||
Sbjct 7136 ACGATCGACATCGTGAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 7077
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || |||||||| || || | || || ||| || ||| ||
Sbjct 7076 CGGTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAACATC 7017
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || |||||
Sbjct 7016 CAGAAGGAGAGCACGCTCCACCTTGT 6991
>seq708
Length=14709
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || ||||| ||||||||||| || || || |||||||| ||
Sbjct 8872 AAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATTTTCGCCGGCAAG 8931
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || || || || ||| ||||||| || || |||||
Sbjct 8932 CAGCTGGAGGATGGCCGCACGCTGAGTGACTACAACATCCAAAAGGAGAGCACGCTGCAC 8991
Query 178125 CTTGT 178129
|| ||
Sbjct 8992 CTCGT 8996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203705891175354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |