Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20slooffiae_20[genbank_20GCA_5F001264965.1_202015-08-11] 1,641 sequences; 8,425,902 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1241 145 2e-29 seq579 138 3e-27 seq824 105 2e-17 seq708 86.0 2e-11 >seq1241 Length=2680 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || ||||| ||||| ||||| || ||| ||||| || Sbjct 2602 TTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCGGACACGATT 2543 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 ||||||||||| ||||| |||||||| || || || |||||||||||||| || || Sbjct 2542 GAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTG 2483 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 || |||||||| || ||||| ||||| || | || || ||| || ||| |||| || Sbjct 2482 ATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAACATCCAGAAG 2423 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || |||||||| || Sbjct 2422 GAGTCGACCCTGCATCTCGT 2403 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || ||||| ||||| ||||| || ||| ||||| || Sbjct 2374 TTCGTCAAGACGCTCACTGGCAAGACGATTACCCTGGAGGTCGAGTCCTCGGACACGATT 2315 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 ||||||||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 2314 GAGAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCGCCGGACCAGCAGCGCCTG 2255 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| ||||| || ||||| || ||||| | || || ||| || ||| |||| || Sbjct 2254 ATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAACATCCAGAAG 2195 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || || || || Sbjct 2194 GAGTCGACGCTCCACCTGGT 2175 >seq579 Length=16948 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || |||||||||||||||||||| || ||| Sbjct 1792 CAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCCGAC 1733 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || ||||| |||||||| || || || |||||||||||||| Sbjct 1732 ACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 1673 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || ||| || ||| || Sbjct 1672 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAACATC 1613 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 1612 CAGAAGGAGTCGACGCTGCACCTGGT 1587 >seq824 Length=8870 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||| | || ||||| || || || |||||||| || ||||| || ||| Sbjct 7196 CAAATCTTCATCAAGACTCTTACTGGCAAGACGATCACGCTGGAGGTCGAGTCGAACGAC 7137 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| | ||| || ||| | |||||||| || || ||||||||||||||||| Sbjct 7136 ACGATCGACATCGTGAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 7077 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| || || | || || ||| || ||| || Sbjct 7076 CGGTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAACATC 7017 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 7016 CAGAAGGAGAGCACGCTCCACCTTGT 6991 >seq708 Length=14709 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct 8872 AAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATTTTCGCCGGCAAG 8931 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || || || || ||| ||||||| || || ||||| Sbjct 8932 CAGCTGGAGGATGGCCGCACGCTGAGTGACTACAACATCCAAAAGGAGAGCACGCTGCAC 8991 Query 178125 CTTGT 178129 || || Sbjct 8992 CTCGT 8996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203705891175354