Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq266 114 2e-20
>seq266
Length=19737
Score = 114 bits (126), Expect = 2e-20
Identities = 429/670 (64%), Gaps = 2/670 (0%)
Strand=Plus/Plus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| ||||||| |||||| || |||| | | || || ||| || ||||| ||||||
Sbjct 13503 GGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATC 13562
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|| || || | || || || | | | |||||| || || ||||| |||
Sbjct 13563 CACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGA 13622
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
|| | || | | || || || |||||||| |||| ||| || | | | || ||
Sbjct 13623 TCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGG 13682
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| ||||| || ||||| || | ||| | || ||||| || || || | | ||| ||
Sbjct 13683 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGC 13742
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295
| |||||| ||| |||| || || |||| ||| || || | |||||||| ||
Sbjct 13743 ACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTG 13802
Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 54355
|| ||||| || || || ||| | || ||| | || || || | |||
Sbjct 13803 TGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTG 13862
Query 54356 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 54415
|| || || ||||| || || ||| |||| | | || || || |||||||||
Sbjct 13863 TCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGG 13922
Query 54416 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 54475
| || || ||||| || | ||| || || ||||| ||||| || || ||
Sbjct 13923 GGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGAC 13982
Query 54476 A-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 54534
| |||| |||||||||||||| || | | ||| || || || || |||||
Sbjct 13983 ATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGAC 14041
Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594
||||| | ||||||||| || | || | | |||| || || ||||| ||||||
Sbjct 14042 GCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGATCCGCAGCAGGTAGGA 14101
Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 54654
|| | || || || ||||| ||||||| ||||| || |||||||| | |
Sbjct 14102 GCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACCGC 14161
Query 54655 TGAGTTGAGT 54664
|||| ||||
Sbjct 14162 CGAGTCGAGT 14171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593713955834400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |