Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq788 504 7e-138 seq342 134 1e-26 seq644 127 2e-24 seq353 104 2e-17 >seq788 Length=40807 Score = 504 bits (558), Expect = 7e-138 Identities = 636/865 (74%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||||| || || || | ||||| || | |||| || Sbjct 1952 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTCCTCTTCCCGATCCGCTACCACGAG 2011 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| ||||||||||||| ||||||| ||||||| Sbjct 2012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTC 2071 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 2072 TCGAAGGACTTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 2131 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| || || || ||||| |||||||||||||| ||||||||||| Sbjct 2132 CACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGC 2191 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| |||||||| || |||||||||||||| |||||| || Sbjct 2192 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 2250 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| |||| Sbjct 2251 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGA 2310 Query 116932 GGAGAAGCTCCGTTTGT--TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | || | |||| | | ||||| ||||||||||| || |||||| |||||||| Sbjct 2311 GCAGCG--TGAGTTTCTCTTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCC 2368 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 |||||||| |||||||||||| | | ||| ||| | ||| |||||||| |||||| Sbjct 2369 GAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCC 2428 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 || || |||||||||||| |||| || |||||| || ||| |||| || ||||||||| Sbjct 2429 TTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAG 2488 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||||||||||| || ||| | ||| |||||||||||||| | || ||||| Sbjct 2489 AAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGC 2548 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 ||||| ||||||||||||| | ||||||| || || | || || |||| | Sbjct 2549 CTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGAAGAAG----CGTGCGCACCC 2604 Query 117230 CGCGTCAGGGA----GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGA 117285 | ||| || ||| ||||||| || || ||||| |||||| ||| | || || Sbjct 2605 TGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGA 2664 Query 117286 AGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || |||| || ||| | || | || ||| | |||| || ||||| |||| Sbjct 2665 CGCCTTGCCTGTTTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATTGAGT 2723 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 | || || ||| | ||||| || | || | | | | |||||||||||| || | |||| Sbjct 2724 TTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACC 2783 Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429 | | ||||||||| | |||||| Sbjct 2784 CCTTCGACTTTATGGAGAACATCTC 2808 >seq342 Length=6017 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| |||| || || | || Sbjct 3373 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 3432 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| ||||| ||||||| Sbjct 3433 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 3492 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 3493 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 3552 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||||| || || ||| ||||| || | || || Sbjct 3553 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 3599 >seq644 Length=45588 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || || ||| | || ||||| | | Sbjct 6052 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 6111 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||||||||| ||||||| Sbjct 6112 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 6171 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 6172 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 6231 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 6232 ATTCAGAAGGAGAGCACCCTGCACCTTGTG 6261 >seq353 Length=5542 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || |||||||||| || || |||| |||||||| || ||||| Sbjct 665 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAACTGGAG 724 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | || ||||| | |||||||| |||||||||||| ||||||||| || || || Sbjct 725 GATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACGCTGCACCTTGTCCTG 784 Query 40903 CG 40904 || Sbjct 785 CG 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515212566552800