Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq644 140 3e-28 seq788 105 6e-18 seq342 104 2e-17 seq266 86.0 5e-12 >seq644 Length=45588 Score = 140 bits (154), Expect = 3e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| | Sbjct 6243 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 6184 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || ||||| |||||||||||||| || || || || | Sbjct 6183 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 6124 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || || Sbjct 6123 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 6064 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 6063 GAAGATTTGCATGGC 6049 >seq788 Length=40807 Score = 105 bits (116), Expect = 6e-18 Identities = 245/360 (68%), Gaps = 11/360 (3%) Strand=Plus/Plus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 ||||| || ||| |||| ||||| | || ||| | || || || ||||||||| || Sbjct 2501 ATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGAC 2560 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGG-ACGCGCCCACCGTCAA 45060 |||||||| ||| || | | | | || || || | || | ||| || || Sbjct 2561 TTTGCCTGTCTC--CTGT--TCAGCCACCTGAAGAAGCGTGCGCACCCTGACACAGTGAA 2616 Query 45061 CGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGA 45120 | ||| || |||| || |||||||| ||| ||| ||||| |||| || |||| | Sbjct 2617 CCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGT 2676 Query 45121 ATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG 45180 ||| || | || ||||||||| | ||| | |||||||||||||||| || || || Sbjct 2677 TTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCG 2736 Query 45181 TCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTA-TACT-GA-GAACCCATTCGAGTT 45237 || |||||| | | | | ||| || | |||| ||| || |||||| ||||| || Sbjct 2737 CCTGCTCGTCAACCT-CGGCAACCC--GAAGCACTACAACTCGACGAACCCCTTCGACTT 2793 Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297 |||| | || || ||| | ||||||| | || ||||| ||| ||||| | ||| || Sbjct 2794 TATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 2853 >seq342 Length=6017 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||||| ||||| ||| Sbjct 3585 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 3526 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 3525 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 3466 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||||| ||| | ||| Sbjct 3465 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 3406 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || ||||| || || || || || | ||||||| Sbjct 3405 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 3371 >seq266 Length=19737 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471 || || | ||| || || |||| ||||||||| || || ||||| ||||| || Sbjct 13857 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 13916 Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529 ||||| | |||| || || ||||| ||||| |||||| ||||||| | | Sbjct 13917 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 13976 Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589 | ||| || | | || || || || ||||| ||||| |||||||| ||| | | Sbjct 13977 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 14034 Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624 |||||||||||||||||||| ||||| | |||| Sbjct 14035 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 14069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433824954072760