Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq266 136 8e-27 seq382 95.1 3e-14 >seq266 Length=19737 Score = 136 bits (150), Expect = 8e-27 Identities = 411/631 (65%), Gaps = 19/631 (3%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||||| ||||| ||||| ||| || || || || || |||||||| Sbjct 14134 TACAACTTCTTTGGCTTCAAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAG 14075 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | ||| || ||||||||| | ||||| || || ||||| || ||| || ||| Sbjct 14074 GTTGCGGAGCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGAC 14015 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCA 248995 | | ||||| | |||||||||||| | ||| | ||| || | ||||| || Sbjct 14014 GTGGCGAGCGCGATCGAGACGTACAACTACATGTCCGAGAAGGC--CTTTACACACGCGT 13957 Query 248996 CACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG 249055 | ||||| || ||||| ||||| || |||| || || |||||||| ||| | Sbjct 13956 CGCCGACCCTGTTCAATGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGA 13897 Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGA 249112 ||| | |||||||| |||| || || || |||||||| | |||| |||| || Sbjct 13896 GTATGAAGGACGACTCGATCGAGGGTATATACGACACGCTCA---AGACCTGTGCGATGA 13840 Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172 | || || ||||| || ||||| | || |||||| || |||| ||| |||| Sbjct 13839 TCAGCAAGACGGCCGGCGGTATTGGTCTGAACATCCACAACATTCGTGCGACGGGCTCGT 13780 Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232 ||||| || || || || || || | ||||| || ||| | || || | | Sbjct 13779 ACATCGCCGGCACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACA 13720 Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGT 249286 ||| || | | | | |||||| ||| ||||| ||| | || || || | Sbjct 13719 ACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC---CGGGCGCCTTTGCGATCT 13663 Query 249287 ATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCA 249346 | |||| ||||||| | || | || || || | || || |||||| | |||| Sbjct 13662 ACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCA 13603 Query 249347 ACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGC 249406 | ||| || | ||||| ||||| ||| | |||||| | |||| ||||||||| Sbjct 13602 AGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGC 13543 Query 249407 GCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 |||| ||| | ||||||| ||| |||| Sbjct 13542 GCCGTGTCGAACAGAACGGCGACTGGTCGCT 13512 >seq382 Length=4175 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||| ||||| || ||||| ||| | || | |||||| | | | | Sbjct 2656 ATCGCACAGCGGCTCTGGATCGGCTCAATGATCTTGTTCGACTGGTTGCACGCAAAGCAG 2715 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || |||||||| || ||| | ||||| | || ||||||||||| ||||| || Sbjct 2716 AAGCGCGTCGTTGGCGCGTAGATCTCCATCGTGCGACGCAGCGCCTGCTGCGCACCCGGC 2775 Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 ||||| ||| ||||||||||||| || ||||| Sbjct 2776 GTCATGCTGTCCGCCTCGTCGAGAATGATGATCTT 2810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073752229639040