Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq788 123 4e-23
seq266 111 2e-19
>seq788
Length=40807
Score = 123 bits (136), Expect = 4e-23
Identities = 389/597 (65%), Gaps = 8/597 (1%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| | ||| || || ||| |||||| ||||| || | || || ||||| ||
Sbjct 2577 AACAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAG 2518
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|||| || || ||||| ||||| ||||| || ||||| || ||||| ||||| || ||
Sbjct 2517 AACGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCC 2458
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCG-- 50127
|| || ||||| || || || ||||||||||| ||||| | ||| | | ||| ||||
Sbjct 2457 GAGAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCGCG 2399
Query 50128 -CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186
||||| ||||| | ||||| |||||||||| || || || ||||| ||
Sbjct 2398 CCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGGATCGTCTC 2339
Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246
|| || || |||||| | | | | || | || || ||||| | ||
Sbjct 2338 GATAGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAG 2279
Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306
||| | ||||| || ||||| || || ||||| || |||||||| || | ||
Sbjct 2278 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGC 2219
Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366
||||| |||||| || | | || || || | | || || || || || |||||
Sbjct 2218 CTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTC 2159
Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAG 50423
|| ||||| || |||| || || | | ||| || || ||| || | |
Sbjct 2158 CGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCG 2099
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
| | ||| || | | || || || | || | || || | ||||| || || ||
Sbjct 2098 GTGGTCCCAGTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGC 2039
Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
||| ||||| || ||||| | |||||| || || || |||| ||||| | |||||
Sbjct 2038 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAA 1982
>seq266
Length=19737
Score = 111 bits (122), Expect = 2e-19
Identities = 437/685 (64%), Gaps = 2/685 (0%)
Strand=Plus/Plus
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
|| || || ||| | || ||||||| |||||| || || | | | || || |||
Sbjct 13488 CCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATG 13547
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010
|| ||||| |||||||| || || | || || || | | | ||||| || ||
Sbjct 13548 AACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCA 13607
Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070
||||| ||||| | || | | || || || |||||||| |||| ||| ||
Sbjct 13608 TGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATC 13667
Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130
|| | | ||||| || ||||| || ||||| || | ||| | || ||||| || ||
Sbjct 13668 GCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTAC 13727
Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190
|| | | ||| || | |||||| ||| ||| || || |||| ||| || ||
Sbjct 13728 ACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCC 13787
Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250
| |||||||| || || ||||| || || || ||| | || ||| | ||
Sbjct 13788 GTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCA 13847
Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310
|| || | ||| || || || ||||| || || || |||| | | || ||
Sbjct 13848 CAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAG 13907
Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370
|| ||||||||| | || || ||||| || | ||| || || ||||| |||
Sbjct 13908 CACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTA 13967
Query 80371 AACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429
|| || || |||| |||| ||||||||||| || || | | ||| ||
Sbjct 13968 AAGGCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTG 14026
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
|| || || ||||| ||||| | ||||||||| || | || | | |||| ||| ||
Sbjct 14027 GATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGAT 14086
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
|| || ||| || || | || || || ||||| ||||||| ||||| ||
Sbjct 14087 CCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCG 14146
Query 80550 TTCGTAAATAATAACCGAGTTGAGT 80574
|||||||| | |||||| ||||
Sbjct 14147 CTCGTAAATCACCGCCGAGTCGAGT 14171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718259552289200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |