Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq788 266 5e-66
seq266 219 6e-52
seq1023 100 4e-16
>seq788
Length=40807
Score = 266 bits (294), Expect = 5e-66
Identities = 587/867 (68%), Gaps = 25/867 (3%)
Strand=Plus/Plus
Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053
||| || || ||| | || || || || ||| | |||||||| ||||| ||||||| ||
Sbjct 1987 CCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTT 2046
Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113
||||| | ||| ||| | || || || |||||| || |||| ||||| || |||
Sbjct 2047 CTGGACCGCCGAGGAGATGGACCTCTCGAAGGACTTGCACGACTGGGACCACCGCATGAA 2106
Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173
|| | |||||| | ||| | ||| | ||||||||||||| | || || || ||
Sbjct 2107 CGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTAT 2166
Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG 125231
||||||||| || ||| | || ||| ||| || || || ||||
Sbjct 2167 CGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTG--CAGGCCGCCGAGGCCCGC 2224
Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
||||| ||||| ||||| |||||||| |||||| | |||||||| | |||||| ||
Sbjct 2225 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTC 2284
Query 125292 ATTGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGAC 125348
|| |||| |||||| ||||| ||| || ||| | | ||||| ||||| |||||
Sbjct 2285 ATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGT---TTCTCTTCAACGCTATCGAG 2341
Query 125349 ACGGTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC-GACA 125406
||| | || ||| | | | || ||| | |||| | || |||||| ||| | |
Sbjct 2342 ACGATCCCCGTCGTCAAGCAGAA-GGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCG 2400
Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466
| || ||| | | || | || ||||| || |||||||| ||||||||||| || ||||
Sbjct 2401 CGCCT-CGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGG 2459
Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526
| ||||| ||||||| ||||||||||||||||| |||||||| || ||| || |
Sbjct 2460 GCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCT 2519
Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586
|||||| | || || || || |||||||| ||| ||||||||| ||| |||||
Sbjct 2520 CGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTT-- 2577
Query 125587 GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646
|| | | ||| | |||| | || ||| | || | | ||| | ||||
Sbjct 2578 -CAGCCACCTG-AAGAAGCGTGCGCACCC-----TGACACAGTGAACCGCATCATCACCG 2630
Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706
| || ||| || || || || ||| | || || || | || || |||| ||||
Sbjct 2631 AGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCA 2690
Query 125707 TGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765
||||| || | || |||||| ||||||| ||||||||||| || || || || | |
Sbjct 2691 TGAAC-GCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAAC 2749
Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825
| || ||| |||||| | | ||| ||||| || || ||| | ||| ||
Sbjct 2750 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 2809
Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAG 125852
|| |||| ||| | ||||||||||||
Sbjct 2810 CTCCAGGGCAAGTCGAACTTTTTCGAG 2836
>seq266
Length=19737
Score = 219 bits (242), Expect = 6e-52
Identities = 383/555 (69%), Gaps = 2/555 (0%)
Strand=Plus/Minus
Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890
||||| |||||| | ||||||| | | | || ||||| ||||||||||| ||
Sbjct 13744 GTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAG 13685
Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950
|| || ||||| | || ||||| |||| || |||||| ||||||||||||| |||||
Sbjct 13684 CGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATT 13625
Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010
|| ||||||| ||| |||| || || | || || | ||| |||| || ||
Sbjct 13624 GATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 13565
Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070
||| | || ||| |||||||| || ||| | | ||| ||||| || ||||||
Sbjct 13564 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 13505
Query 97071 CCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACG 97130
|||| | || || |||||| | || |||| ||||| |||||||| || |||| |
Sbjct 13504 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 13445
Query 97131 GCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGC 97189
||||||| |||||||| | | | ||| | || | |||| |||||| | ||
Sbjct 13444 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGC-AGAAGCTGTGGTACGC 13386
Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249
||| | ||| || | ||||| || | ||| | | || |||||||| | | |||
Sbjct 13385 TATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGGCGAA 13326
Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309
||||| || ||||| || ||||||| |||||| |||| || || |||||||| ||
Sbjct 13325 CCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGGAGAT 13266
Query 97310 TGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369
| | |||||| ||| ||||||||||| || || ||| ||||| ||| | |||||
Sbjct 13265 TATCGAGTACAGCTCGCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCGCTGCC 13206
Query 97370 CAAGTTTGTAGAGGG 97384
| |||| | |||||
Sbjct 13205 GACGTTTATTGAGGG 13191
>seq1023
Length=24217
Score = 100 bits (110), Expect = 4e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
|| || || ||||| ||||||||||| ||||| ||| | |||| ||| | ||||||||
Sbjct 15474 GAAGGTGACCTGGGTCCAGTGTACGGCTTCCAATGGCGCCACTTTGGCGCGAAGTATGTG 15533
Query 70124 GACTGC-GAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACA 70181
|| ||| || || |||| |||||||||||| |||||| | || || |||| ||
Sbjct 15534 GA-TGCTGATACCAACTACCAGGGTCAGGGTGTCGATCAACTCGCCCAC-GTCATCGAAC 15591
Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241
||||||| || ||||| || || | || || || || ||||||| || |||
Sbjct 15592 AAATCAAGACGAACCCAACGGACCGGCGCATTTTACTGAGCGCATGGAACCCCATCGATC 15651
Query 70242 TGCACCAAATGGCACTACCACCGTGTCA 70269
|| || | ||||| || ||||| |||||
Sbjct 15652 TGGACAACATGGCGCTTCCACCTTGTCA 15679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741049658862800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |