Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq788 266 5e-66 seq266 219 6e-52 seq1023 100 4e-16 >seq788 Length=40807 Score = 266 bits (294), Expect = 5e-66 Identities = 587/867 (68%), Gaps = 25/867 (3%) Strand=Plus/Plus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || || ||| | || || || || ||| | |||||||| ||||| ||||||| || Sbjct 1987 CCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTT 2046 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | ||| ||| | || || || |||||| || |||| ||||| || ||| Sbjct 2047 CTGGACCGCCGAGGAGATGGACCTCTCGAAGGACTTGCACGACTGGGACCACCGCATGAA 2106 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || | |||||| | ||| | ||| | ||||||||||||| | || || || || Sbjct 2107 CGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTAT 2166 Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG 125231 ||||||||| || ||| | || ||| ||| || || || |||| Sbjct 2167 CGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTG--CAGGCCGCCGAGGCCCGC 2224 Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291 ||||| ||||| ||||| |||||||| |||||| | |||||||| | |||||| || Sbjct 2225 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTC 2284 Query 125292 ATTGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGAC 125348 || |||| |||||| ||||| ||| || ||| | | ||||| ||||| ||||| Sbjct 2285 ATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGT---TTCTCTTCAACGCTATCGAG 2341 Query 125349 ACGGTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC-GACA 125406 ||| | || ||| | | | || ||| | |||| | || |||||| ||| | | Sbjct 2342 ACGATCCCCGTCGTCAAGCAGAA-GGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCG 2400 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 | || ||| | | || | || ||||| || |||||||| ||||||||||| || |||| Sbjct 2401 CGCCT-CGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGG 2459 Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 | ||||| ||||||| ||||||||||||||||| |||||||| || ||| || | Sbjct 2460 GCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCT 2519 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586 |||||| | || || || || |||||||| ||| ||||||||| ||| ||||| Sbjct 2520 CGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTT-- 2577 Query 125587 GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646 || | | ||| | |||| | || ||| | || | | ||| | |||| Sbjct 2578 -CAGCCACCTG-AAGAAGCGTGCGCACCC-----TGACACAGTGAACCGCATCATCACCG 2630 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 | || ||| || || || || ||| | || || || | || || |||| |||| Sbjct 2631 AGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCA 2690 Query 125707 TGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765 ||||| || | || |||||| ||||||| ||||||||||| || || || || | | Sbjct 2691 TGAAC-GCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAAC 2749 Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825 | || ||| |||||| | | ||| ||||| || || ||| | ||| || Sbjct 2750 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 2809 Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAG 125852 || |||| ||| | |||||||||||| Sbjct 2810 CTCCAGGGCAAGTCGAACTTTTTCGAG 2836 >seq266 Length=19737 Score = 219 bits (242), Expect = 6e-52 Identities = 383/555 (69%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 ||||| |||||| | ||||||| | | | || ||||| ||||||||||| || Sbjct 13744 GTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAG 13685 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 || || ||||| | || ||||| |||| || |||||| ||||||||||||| ||||| Sbjct 13684 CGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATT 13625 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 || ||||||| ||| |||| || || | || || | ||| |||| || || Sbjct 13624 GATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 13565 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070 ||| | || ||| |||||||| || ||| | | ||| ||||| || |||||| Sbjct 13564 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 13505 Query 97071 CCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACG 97130 |||| | || || |||||| | || |||| ||||| |||||||| || |||| | Sbjct 13504 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 13445 Query 97131 GCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGC 97189 ||||||| |||||||| | | | ||| | || | |||| |||||| | || Sbjct 13444 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGC-AGAAGCTGTGGTACGC 13386 Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249 ||| | ||| || | ||||| || | ||| | | || |||||||| | | ||| Sbjct 13385 TATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGGCGAA 13326 Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 ||||| || ||||| || ||||||| |||||| |||| || || |||||||| || Sbjct 13325 CCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGGAGAT 13266 Query 97310 TGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369 | | |||||| ||| ||||||||||| || || ||| ||||| ||| | ||||| Sbjct 13265 TATCGAGTACAGCTCGCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCGCTGCC 13206 Query 97370 CAAGTTTGTAGAGGG 97384 | |||| | ||||| Sbjct 13205 GACGTTTATTGAGGG 13191 >seq1023 Length=24217 Score = 100 bits (110), Expect = 4e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123 || || || ||||| ||||||||||| ||||| ||| | |||| ||| | |||||||| Sbjct 15474 GAAGGTGACCTGGGTCCAGTGTACGGCTTCCAATGGCGCCACTTTGGCGCGAAGTATGTG 15533 Query 70124 GACTGC-GAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACA 70181 || ||| || || |||| |||||||||||| |||||| | || || |||| || Sbjct 15534 GA-TGCTGATACCAACTACCAGGGTCAGGGTGTCGATCAACTCGCCCAC-GTCATCGAAC 15591 Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241 ||||||| || ||||| || || | || || || || ||||||| || ||| Sbjct 15592 AAATCAAGACGAACCCAACGGACCGGCGCATTTTACTGAGCGCATGGAACCCCATCGATC 15651 Query 70242 TGCACCAAATGGCACTACCACCGTGTCA 70269 || || | ||||| || ||||| ||||| Sbjct 15652 TGGACAACATGGCGCTTCCACCTTGTCA 15679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741049658862800