Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq342 84.2 2e-11 >seq342 Length=6017 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || | ||||||||||| Sbjct 3575 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCGACCATCCTCCAGCTG 3517 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||| || ||| || | || ||||||||| || || Sbjct 3516 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 3457 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | | || || |||| ||||||| ||||| || || || || ||||| Sbjct 3456 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 3397 Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTGTCT--TGATCGAAGAAAGAGTGATGT 48754 || || || || || | ||||| || || | | | || |||| ||| ||| Sbjct 3396 AAGGGTCTTGACGAACACTTGCATGGTAACTGCTAACCAAACAAAGTGTGGTGT 3343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421245911981030