Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq788 87.8 2e-12
seq342 84.2 2e-11
>seq788
Length=40807
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 119664 TCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCA 119723
|| ||||| || | |||||||| || || ||||| | |||||| ||||| || || |
Sbjct 2835 TCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGTC 2776
Query 119724 GTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCGATG 119783
| |||| | ||||| || ||| | | || | ||| || || ||||||||||| |||
Sbjct 2775 GAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACAAACTCAATG 2716
Query 119784 TATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAG 119843
|| | ||||||| ||| |||||||| | || | || || || || | || ||
Sbjct 2715 TACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTCAAA 2656
Query 119844 AAATCCTTTTCAATGTCGACCGCTTC 119869
|| |||| |||||| | || || ||
Sbjct 2655 AAGTCCTGCTCAATGGCCACAGCCTC 2630
>seq342
Length=6017
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||||||||| || || || | || || || |||||||| |||| | || || |
Sbjct 3373 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 3432
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| |||||| | || || ||||| ||||| || || || ||||| || |||
Sbjct 3433 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 3492
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | || |||||| || || || |||| | | | | |||||||| |||
Sbjct 3493 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 3552
Query 26949 ATTCAAAAAGA 26959
|| || || ||
Sbjct 3553 ATCCAGAAGGA 3563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478656237221600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |