Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq788 223 3e-53 seq266 183 3e-41 seq644 129 6e-25 seq342 123 2e-23 seq353 89.7 5e-13 >seq788 Length=40807 Score = 223 bits (246), Expect = 3e-53 Identities = 354/503 (70%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCGACTTTCGCCGAGC 46156 |||| |||| ||||| || |||||| |||| || || || ||| | |||| Sbjct 2361 AGAAGGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCG---TTCTCGGAGC 2417 Query 46157 GTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCT 46216 | | ||||||||||| || |||||| ||||||| || ||| |||||| |||||| Sbjct 2418 GCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCT 2477 Query 46217 TTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | | |||| | ||| ||||||| || ||| |||| |||||||| || |||| Sbjct 2478 TCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGC 2537 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 |||| ||||||||||| || |||||||| |||||| || | || | | || | | Sbjct 2538 GCGATGAGGGCCTGCACACCGACTTTGCCTGTCTC--CTGTT-CAGCCACCTGAAG---A 2591 Query 46337 AGCTTGCGCCC---GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGG 46393 ||| ||||| | ||||| ||| |||| ||| ||||| |||||||||||| ||| Sbjct 2592 AGCGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGG 2651 Query 46394 AGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCG 46453 | ||||| || | ||| |||| | | | ||| | ||||||||||| | |||||| Sbjct 2652 ACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCC 2711 Query 46454 ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTC 46513 | ||||| |||||||| |||||||| |||||||| | || | | |||||||| | Sbjct 2712 AGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACA 2771 Query 46514 ACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTT 46573 || || || || || || |||||| | |||||||| || ||||||| | || |||| Sbjct 2772 ACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTT 2831 Query 46574 TCGAAAAGCGCGTCGGCGAGTAT 46596 |||| ||||| | ||| ||| Sbjct 2832 TCGAGCGCCGCGTTGCCGACTAT 2854 >seq266 Length=19737 Score = 183 bits (202), Expect = 3e-41 Identities = 940/1459 (64%), Gaps = 55/1459 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| ||||| | |||||| |||| || | ||| |||| | || Sbjct 12639 TTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGC 12698 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||| ||||| ||| || | || || |||||| ||||| | Sbjct 12699 TCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATC 12758 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || |||||||| ||||||| || | | |||| |||| |||| ||||| Sbjct 12759 AGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCAC 12818 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | |||| | || ||||||||||||||||| | ||||| ||| |||||| Sbjct 12819 AGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTG 12878 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| || ||| || | || |||||||| || ||||| || Sbjct 12879 CCCTCGTACGTCTCGTA--TGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCA-AG 12935 Query 145356 CGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 |||| | ||||| ||||| || ||| || ||||| ||| || | ||| || Sbjct 12936 -GCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTC 12994 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | |||| || || | | || |||||||| || ||||| | || | |||||||| Sbjct 12995 GAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGG 13054 Query 145474 CCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 || || |||||| | | | | || ||| | ||| || || ||||| | Sbjct 13055 GCGGTGCCGCATGTTCGAGCGACGT-GCACTCTCCACAGGGTAGTAGTTGATATCGATGA 13113 Query 145533 TTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAA- 145590 | |||| ||| | |||| || || || | | || ||| || |||| | Sbjct 13114 TGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTAT 13172 Query 145591 ----CCGAGCCTCGTCAACGACCAC-ACAGCTATTGACGGCG--ATCGACGCCAAATTAC 145643 |||| | | | | || | | | | | | ||| |||||||||| || | Sbjct 13173 GTCTTCGAGGCAC--CGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGC 13230 Query 145644 AAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 | || || ||||| | ||||| |||||| | | ||||| | ||| | || | Sbjct 13231 ACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTC 13289 Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762 ||||| || ||||| || | ||| ||||| || | ||| || ||||||||| || | Sbjct 13290 TTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 13349 Query 145763 TACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCAC 145820 | || ||| ||||| | |||| ||| | ||| | || || || | |||||| Sbjct 13350 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGCGTACCACAGCTTCTGCGCCT 13407 Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 || ||| | ||||||||| ||||| ||| ||| || | |||||| | Sbjct 13408 TGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCT 13467 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 || ||||| || | ||| || || |||| | ||| |||||||||||||| |||||| Sbjct 13468 CGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGT 13527 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000 | | ||| || ||| |||| ||| || | ||||||||| | || |||||||| Sbjct 13528 TCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCG 13587 Query 146001 CTTTGCA-ATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCG 146057 | ||| ||||| ||||| ||| || || || || | | | | ||||| Sbjct 13588 C-GCGCACTTCCTC-CTTGCCATGGTTCTTGC-GCAGATCAATAAATTCAAAAACGTCCG 13644 Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCA 146114 ||||||||| || | |||| || | ||| || || ||||| |||||||||| Sbjct 13645 AGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCA 13704 Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGT 146174 ||| || || ||||||| | ||||| | ||||||| | | ||| || || |||| Sbjct 13705 CGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGT 13764 Query 146175 TCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCA----ATGAACATTCACGCCGAGA 146230 |||| | || | ||| || |||||| | || | |||| || | | Sbjct 13765 TCGTGCCGGCGATGTACGAGCC-CG---TCGCACGAATGTTGTGGATGTTCAGACCAATA 13820 Query 146231 CCGCC-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAAT 146289 ||||| ||||| |||| || || ||| |||||| ||||| || || || || Sbjct 13821 CCGCCGGCCGT-CTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGAT 13879 Query 146290 GCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 ||| |||| || | | || |||||||| |||| || | | ||||| || Sbjct 13880 CGAGTCGTCCTTC--ATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCG 13937 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGT 146406 || ||||| ||||| |||||| ||||| || |||| ||| ||||| Sbjct 13938 GCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGG-ACATGTAGTTGTACGT 13996 Query 146407 TTCGATAGCGTCTTG-AATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGT 146465 ||||| ||| || | | ||| ||||| || ||||| | ||||||||||||||||||| Sbjct 13997 CTCGATCGCG-CTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGT 14055 Query 146466 GTTGGGGCCGCTCCGCCAC 146484 | ||||| |||||||| || Sbjct 14056 GCTGGGGGCGCTCCGCAAC 14074 >seq644 Length=45588 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||| ||||||||||| ||||||| ||||| | Sbjct 6266 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 6207 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | |||||| |||||||||||||| || || ||| Sbjct 6206 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 6147 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | ||||||| || | ||||| Sbjct 6146 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 6087 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || ||||| || ||||| || |||||| Sbjct 6086 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 6051 >seq342 Length=6017 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | || |||||| || |||||||| |||||| Sbjct 3599 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3540 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||| |||||||||||| Sbjct 3539 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 3480 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || |||| ||||| | Sbjct 3479 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 3420 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || ||||| || || || ||||| | |||||| Sbjct 3419 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATG 3372 >seq353 Length=5542 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||| || | || | || |||||| || || ||||| || ||| Sbjct 798 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 739 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| || |||| | |||||||||||||| || Sbjct 738 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 679 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || || || ||||| ||| ||| ||||| |||| Sbjct 678 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGA-CTGC 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006722835200