Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq266 111 2e-19
>seq266
Length=19737
Score = 111 bits (122), Expect = 2e-19
Identities = 440/690 (64%), Gaps = 2/690 (0%)
Strand=Plus/Plus
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|||| || || || || | || ||||||| |||||| || |||| | | || ||
Sbjct 13483 CCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGC 13542
Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137
||| || ||||| |||||||| || || | || || || | | | |||||| |
Sbjct 13543 GCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCT 13602
Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197
| || ||||| ||||| | || | | || || || |||||||| |||| ||
Sbjct 13603 TGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGT 13662
Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257
| || || | | || || || ||||| || ||||| || | ||| | || ||||| |
Sbjct 13663 AGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGT 13722
Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317
| || || | | ||| || | |||||| ||| ||| || || || | ||| ||
Sbjct 13723 TGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACG 13782
Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| | |||||||| || || ||||| || || || ||| | || ||| |
Sbjct 13783 AGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCA 13842
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | ||| || || || ||||| || || ||| |||| | | |
Sbjct 13843 TCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAA 13902
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || || ||||||||| | || || ||||| || | ||| || || ||||
Sbjct 13903 GGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGT 13962
Query 63498 GAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556
| ||||| || || || | |||| ||||||||||| || || | | |||
Sbjct 13963 GTGTAAAGGCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCG 14021
Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616
|| || || || ||||| ||||| | ||||||||| || | || | | ||||
Sbjct 14022 CCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCA 14081
Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676
|| || || || |||||| || | || || || ||||| ||||||| |||
Sbjct 14082 TTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAG 14141
Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGT 63706
|| || |||||||| | |||||| ||||
Sbjct 14142 TCGCGCTCGTAAATCACCGCCGAGTCGAGT 14171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633623841988000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |