Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq266 111 2e-19 >seq266 Length=19737 Score = 111 bits (122), Expect = 2e-19 Identities = 440/690 (64%), Gaps = 2/690 (0%) Strand=Plus/Plus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| || || || || | || ||||||| |||||| || |||| | | || || Sbjct 13483 CCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGC 13542 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 ||| || ||||| |||||||| || || | || || || | | | |||||| | Sbjct 13543 GCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCT 13602 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| ||||| | || | | || || || |||||||| |||| || Sbjct 13603 TGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGT 13662 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | | || || || ||||| || ||||| || | ||| | || ||||| | Sbjct 13663 AGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGT 13722 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | || || | | ||| || | |||||| ||| ||| || || || | ||| || Sbjct 13723 TGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACG 13782 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || | |||||||| || || ||||| || || || ||| | || ||| | Sbjct 13783 AGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCA 13842 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | ||| || || || ||||| || || ||| |||| | | | Sbjct 13843 TCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAA 13902 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || ||||||||| | || || ||||| || | ||| || || |||| Sbjct 13903 GGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGT 13962 Query 63498 GAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 | ||||| || || || | |||| ||||||||||| || || | | ||| Sbjct 13963 GTGTAAAGGCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCG 14021 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || || || || ||||| ||||| | ||||||||| || | || | | |||| Sbjct 14022 CCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCA 14081 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || || || |||||| || | || || || ||||| ||||||| ||| Sbjct 14082 TTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAG 14141 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 || || |||||||| | |||||| |||| Sbjct 14142 TCGCGCTCGTAAATCACCGCCGAGTCGAGT 14171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623841988000