Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq788 150 2e-31
>seq788
Length=40807
Score = 150 bits (166), Expect = 2e-31
Identities = 390/591 (66%), Gaps = 5/591 (1%)
Strand=Plus/Minus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||||||||| || | || || || || || || | ||| || ||| | | |
Sbjct 2568 CAGGCAAAGTCGGTGTGCAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGA 2509
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || ||||||||||| || || || ||||| || || |||||
Sbjct 2508 CCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAG 2449
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG-GAATTACTGCT 93270
|| || || ||||| ||||| ||||||| || || | || ||| | | | |
Sbjct 2448 ATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGA- 2390
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
|||||| | ||||| ||||| || | ||| | || | || |||||||||||
Sbjct 2389 GATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGGATCGTCTCGATAGCGTT 2330
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| || | || |||| |||| || || ||||| || ||||| | || || ||| |
Sbjct 2329 GAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGT 2270
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
|| || |||| |||||||| || ||||| |||||||| || | || || | |
Sbjct 2269 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGC 2210
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
|||||| || || | ||| || || || || ||||| ||||| || || || ||
Sbjct 2209 CTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGC 2150
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCA 93567
||| || |||| | || | | ||| || ||||| || || | | | |||||
Sbjct 2149 AAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCA 2090
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
||| | || || || || || | || ||| | ||||| ||||| || || || ||
Sbjct 2089 GTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTT 2030
Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
|||||||| | ||| || || || || | || || || | |||||| ||
Sbjct 2029 CTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAAGCG 1979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556853630417200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |