Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq788 167 5e-36 seq388 116 8e-21 seq1029 105 1e-17 >seq788 Length=40807 Score = 167 bits (184), Expect = 5e-36 Identities = 398/592 (67%), Gaps = 11/592 (2%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || ||||| ||||| || || |||||||||| || ||||| |||||| ||||||||| Sbjct 2844 ACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAG 2785 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 ||||| || | ||||| ||||| || | ||| || |||| | |||||| |||||| Sbjct 2784 GGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACGAGCAGGCGGTCCGCCACA 2725 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || | ||||||||| |||| ||| | ||| | || Sbjct 2724 AACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCA-GCGAAACAGGCAAGGC 2666 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 ||| | || |||| || |||| || ||||| | || |||| ||||| Sbjct 2665 GTCAGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCA-CTGTGT 2607 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 ||| | || | |||| ||| | | ||||||| | |||| | |||||| | Sbjct 2606 CAGGGTGCGCACGCTTCTTCAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGC 2547 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 |||| ||||| ||||| |||||| || | ||| |||||||| | || || ||| Sbjct 2546 CCTCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCT 2487 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971 ||||||||||||| | | ||| || || ||||| | | |||||||| | | | Sbjct 2486 TGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGG 2427 Query 251972 CAACAAGGCGCTCAGCAAACGACTTG-TCCTG--CGACAAGAACTTCTGTGCCCATGCTG 252028 | ||||||||||| | ||||| | |||| ||| | | | | ||||| | | Sbjct 2426 CCACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGG 2367 Query 252029 CCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||||| || ||||||| || ||||| || | |||||| | | |||| || Sbjct 2366 CCTTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCACGCT--GCTC 2309 Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || || |||| || || | ||||| |||||| ||||||| |||||| Sbjct 2308 CGGCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATG 2257 >seq388 Length=4052 Score = 116 bits (128), Expect = 8e-21 Identities = 397/613 (65%), Gaps = 18/613 (3%) Strand=Plus/Minus Query 218402 GCGAGCTCATCGACCGATCTTTCAACAAGTCTCGTCCTGATGAGCGCAAGACCTGGCTGC 218461 |||| ||| |||||| | ||||||||| | || || |||||| ||||||| Sbjct 1991 GCGATCTCGTCGACCTGGCCTTCAACAAGAAGAAGGCGGACGACCGCAAGGAGTGGCTGC 1932 Query 218462 TCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGAC-CAACATCCCCGTCCCTGAC 218520 | | ||| ||| || | | | ||||||| || | | | | |||||| || | ||| Sbjct 1931 GCCAGTTCGTGCCGGGCACCTACCTGGACCAC-CGCATCCGCCAGATCCCCATCTCGGAC 1873 Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTATTCC 218576 || ||| |||||||||| || || ||||| |||| | || | || || || || Sbjct 1872 TTTATCAACAAGGAGCTGATCCTCTTCTCCATGGCGG-ACAATATC---CGCTCGATCCC 1817 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||||||| || ||||||||||| ||||| ||| |||| || | |||||||| Sbjct 1816 GAGCGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCG 1757 Query 218637 GAACCTGGTTCAA----GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 |||| |||| ||||| ||||| ||| | ||||| || || || Sbjct 1756 TAACC----TCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACA 1701 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACT 218752 | | || || ||||| || ||||||||| | ||||| ||| | || ||||||| Sbjct 1700 CGGCGTATCACCACGGCGACCAGAGTCTGGTAATGACGATTGTGGGCCTTGCGCAGGACT 1641 Query 218753 ATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTAT 218812 | ||||| |||||| |||| |||| | |||||||| || || || | || Sbjct 1640 TTTGCGGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCA 1581 Query 218813 TGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGC 218872 |||| || ||||| || ||| | || || || || || ||| | | |||| Sbjct 1580 TGGGCGGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCATCACGC 1521 Query 218873 GCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTT 218932 ||||| | ||| | | | || || | ||||| || || || || || || || Sbjct 1520 GCCAGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGA 1461 Query 218933 CGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATG 218992 || |||||||||||||| || || | | ||| |||| | || || ||| | | Sbjct 1460 GCATCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACG 1401 Query 218993 GTATCGGGACAGG 219005 ||||||| || || Sbjct 1400 GTATCGGCACGGG 1388 >seq1029 Length=21324 Score = 105 bits (116), Expect = 1e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 10891 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTGGCCTACGGTGCCAAGATTCTGCTGAAC 10832 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||||| |||| || |||||| |||| || || | Sbjct 10831 ACCGCCACCCTGCGCCTCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCC 10772 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| || || ||||||||||| ||||| ||| | | ||| |||| ||| Sbjct 10771 GGTAAGTCGACCCTGATGCGCGCCATCCAGAACGGCCAGGTCG-AGGGCTTCCCGTCGCC 10713 Query 279525 T-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | ||||| | || ||| || ||||||||| ||||| Sbjct 10712 TGAGGAGGTCCGCACCTGGTACGTCGAGCACGACCTCGAC 10673 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 |||||||||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 10537 CTGTCGGGTGGTTGGAAGATGAAGCTCGCCCTGGCCCGTGCCGTGCTGTTCAAGGCCGAC 10478 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 | || ||||| |||||||| ||||||||| ||||| | |||||| |||||| | | Sbjct 10477 ATTCTGCTGCTCGATGAGCCGACCAACCACTTGGACGTGATCAACGTGGCCTGGATCACG 10418 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || | | ||| | | || ||||||| || |||||||| ||| Sbjct 10417 AACTACCTGTGCACT---ACGAACGCCACCTCAATCATTGTGTCGCACGACTCCAAGTTC 10361 Query 279885 CTAGATGCCGTGTG 279898 || | | |||||| Sbjct 10360 CTGAACGACGTGTG 10347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823235766230