Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq788 226 5e-54 seq342 143 5e-29 seq1029 129 1e-24 seq644 116 7e-21 >seq788 Length=40807 Score = 226 bits (250), Expect = 5e-54 Identities = 594/891 (67%), Gaps = 29/891 (3%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||| ||||| || || | || ||||||||||| ||||| |||||||||| ||| Sbjct 2868 ACGCCGGCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGC 2809 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || ||| |||||| ||||| ||||||||| | | | ||||| |||| ||||| Sbjct 2808 GAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAG- 2750 Query 10059 GCTG-TGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 | || || | |||||| ||||| ||||| |||||||||| ||| ||| || |||||| Sbjct 2749 GTTGACGAGCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCAT 2690 Query 10118 GCCAATCATGCGGCA-GGGGATGGCGTC--GCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 ||| |||| ||| | || | |||||| |||| ||||||| || |||| || || Sbjct 2689 GCCGATCA-GCGAAACAGGCAAGGCGTCAGTCAAA--AAGTCCTGCTCAATGGCCACAGC 2633 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGG---GACAGCTTGTTCTCGAGCTTCGAATA 10231 || || ||||| || || |||| || | |||| ||| | | | || | Sbjct 2632 CTCGGTGATGATGCGGTTCACTGTGTCAGGGTGCGCACGCTTCTTCAGGTGGCT-GA--A 2576 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 |||||| |||| | ||| |||||||| ||||| ||||| |||||| || || Sbjct 2575 CAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGAA 2516 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 |||||| |||||||| || || || |||||||| |||| | ||||| || || Sbjct 2515 CGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGA 2456 Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGA---AGGAGCGGTC 10408 ||| | | ||||| ||| | |||| || |||||||| | || ||| ||| Sbjct 2455 GAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCGCGCCT 2396 Query 10409 GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGAT 10468 | ||| | | | ||||||| | ||||||| ||| | |||||||||||||| Sbjct 2395 GTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGGATCGTCTCGAT 2336 Query 10469 AGCCTCGAAGAGCTTGTTAC---GCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAG 10525 ||| | |||||| | || |||| | |||| | || | | || | ||| || Sbjct 2335 AGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCG-CGGATGTACGTG--TCGATGAGGAG 2279 Query 10526 GGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGC 10585 ||||| ||| ||||| | |||| | |||| | ||||||| || || Sbjct 2278 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGC 2219 Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645 | || | || || || || ||| | | ||||||||| | || || || || Sbjct 2218 CTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTC 2159 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA---G 10702 | ||||||||| | |||| ||| | | ||||||||||||| ||||||| | Sbjct 2158 CGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCG 2099 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 | || |||||| || |||| ||| | | |||||| |||||||||| | Sbjct 2098 GTGGTC---CCAGTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGA 2042 Query 10763 GGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||| ||||||||||||||||||| | || ||| |||| ||||| ||||| Sbjct 2041 GGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAA 1991 >seq342 Length=6017 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| |||||| ||| || |||||||| || ||| Sbjct 3599 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3540 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | |||||||| || || Sbjct 3539 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 3480 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 3479 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 3420 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| | ||||| Sbjct 3419 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 3373 >seq1029 Length=21324 Score = 129 bits (142), Expect = 1e-24 Identities = 677/1067 (63%), Gaps = 58/1067 (5%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||||||||| || | || ||||| | ||||||| || ||| ||||||| Sbjct 9863 CTCCAGGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTCCAGCGGCGTCTTGTCCAG 9922 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||| | ||||| |||||||| || |||||||| ||||| | ||| || ||| || || Sbjct 9923 GTGCTGGTCAATGTGGTGGAACGCGTGCTGGGCAACGTAACCAATGACCAGGTTAGGGTG 9982 Query 225076 CTTCCACACAGAGC-CCCGAGTCGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTA 225133 |||||||| | | ||||||| || | | || ||| | | ||| | ||||| Sbjct 9983 CTTCCACA--GCTCACCCGAGTTGGGCTCCGTGTCACCGACCACCAGCTTCACCAGCGTC 10040 Query 225134 GTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATTGCAACCTGC--- 225190 | ||| |||| ||| ||||| || | ||| | | || || |||| | | |||| Sbjct 10041 GACTTACCCGAACCGTTGGGACCCAGCACAGCCACACGCGACGACAGCGACAGCTGCATC 10100 Query 225191 GAGTTC--ACG---TTGCTGAAGATCTCAGG---GCCAGTTTGGTAAGCAAAGGCCACGC 225242 ||| | ||| |||| | | | || ||| | |||| ||| ||||| Sbjct 10101 GAGATACTACGCAATTGCGG-----CGCCGGCGTGCCGG---GGTACTGGAAGACCACGT 10152 Query 225243 CACGCAGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGG 225302 |||||| ||||| || | ||||||| | | ||| ||||| | | ||| | || Sbjct 10153 CACGCATCTTCACGAGCGACTTCTCCTTGGTCTTGACACCGTCCAGCAGCGGGGGGTTGG 10212 Query 225303 GGAACTCCCACTTGGTCACCGCGTCC---TTCAGGTCGTAGTAAGATGCAGCCTCGGGT- 225358 | | || || | || || || ||||| ||| || | |||||| || Sbjct 10213 GCAGCTTGAACGAGTAGTCCTCGCCCGAGTTCAGCTCGACATAGGCACGAGCCTCCGGCA 10272 Query 225359 --CGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCT 225416 ||||| ||| || || |||||| ||| ||| | ||| ||||| | ||| Sbjct 10273 CACGCTT---CACAAAGGCGTCCAGGTTGCCGGGGTAACGCTTGATCTTGAAGCGGTTCA 10329 Query 225417 CGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGA 225476 || | | ||| | | ||||| ||| ||||| |||||||| |||||||||| Sbjct 10330 GGT---GCAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGA 10386 Query 225477 TGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGT 225536 | || | ||||||| || | | || |||||| ||| ||||||||| | |||| Sbjct 10387 TTGAGGTGGCGTTCGTAGTGCACAGGTAGTTCGTGAT---CCAGGCCACGTTGATCACGT 10443 Query 225537 CCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCG 225596 ||| |||||| || || || || || ||||| ||||| || | | || | ||| || | Sbjct 10444 CCAAGTGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGG 10503 Query 225597 TGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGATTGAAACAGAGTG-CTTA 225655 || | |||||||| ||||| || || ||||||| ||| | | | | || | Sbjct 10504 CCAGGGCGAGCTTCATCTTCCAACCACCCGACAGGGCCGTGATAGGACCGGCCTGACGCT 10563 Query 225656 GCTTCGTCAAAGCCGTACTCCAGGAGCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCG 225715 || ||||| ||||| ||| ||||||| | ||| || ||| | Sbjct 10564 GC-TCGTCGAAGCCCATCTCAGCCAGCGTCTTG---------GCGGCCGACTCGCG---G 10610 Query 225716 GCAACGTT--GG----GGTCGGACGAGAGGTAATCATATACGGTCATGTCCGAGACAGAC 225769 | ||||| || ||| | || | | || | | ||||| | || Sbjct 10611 TCGACGTTCAGGCGCTTGTCCTGCAGGATGAACTCCAGAATCGAAATGTCACCCTCCGAG 10670 Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 |||| | |||||| || |||||| || |||| || || ||||||||||| Sbjct 10671 CCGTCGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCAGGCGACGGGAAGCCCTCG 10730 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 | |||||| || || || || | |||||| ||| || | ||||| |||| | Sbjct 10731 ACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTACGACCACAG 10790 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || ||||| | | || ||||||| | ||| | || |||||| || |||||| || Sbjct 10791 AGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCA 10850 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || ||||| || ||||||| || | ||||||||||| |||||||| Sbjct 10851 CCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCCCTCCTC 10897 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566 |||||||| ||||| | ||||||||||||||| ||||| | ||| | |||||| || Sbjct 9399 AGCGACTCACGGTCCAAGAAGTTCGTCGGCTCGTCCAGCACGATGATGTGGGGCATACGC 9458 Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGC 224626 ||| || ||||| | ||| | ||| ||||||||||| || || || || || ||| Sbjct 9459 CACGTCGCAGCACCGAGCACGACCTTGACCTTCTGACCACCCGAAAGACCACGCATCGTG 9518 Query 224627 GAGTGAGTCGTGAATTCGGGGTCAAGACCAA 224657 ||| | ||||| || | || ||||||| Sbjct 9519 TTGTGCGAGGTGAACTCACGCTCGAGACCAA 9549 >seq644 Length=45588 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || || ||||| || ||| || || | || || || | ||| Sbjct 6255 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 6196 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || || | |||||||| || || ||||| |||||||| || ||||| Sbjct 6195 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 6136 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||||| ||||| | || || || || | ||| || || || || || Sbjct 6135 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 6076 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || ||||| Sbjct 6075 CAGAGTCTTGACGAAGATTTGCAT 6052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921610534111600