Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq266 273 2e-68 seq788 197 1e-45 seq644 134 1e-26 seq342 107 2e-18 >seq266 Length=19737 Score = 273 bits (302), Expect = 2e-68 Identities = 960/1469 (65%), Gaps = 65/1469 (4%) Strand=Plus/Plus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||||||||| || ||||| || || | ||| || | || || | ||||| ||| Sbjct 12634 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 12693 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| | ||||| ||| || || ||| ||||| || ||||||||| || Sbjct 12694 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 12753 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 ||| || || || || |||| |||||| ||| | |||| | || ||| | Sbjct 12754 CCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGT 12813 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| ||||||| || |||||||||||||||||| | | || | ||| | Sbjct 12814 CCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAG 12873 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTC 153322 | ||||| | |||| ||| |||| | | || ||||| |||||||| ||| Sbjct 12874 GGCTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCTGCGCTC 12931 Query 153323 GAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT 153382 | || ||| ||| ||||| || ||| || ||| || | | ||| || | ||| Sbjct 12932 CAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCT 12991 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| |||| || || | || || || ||||| || ||||||| ||||| ||||| Sbjct 12992 GTCGAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGAT 13051 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || ||| | ||| ||| | || ||| | | || |||| ||| |||||| Sbjct 13052 GGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGAT 13111 Query 153503 AATTTTGTTGAGGTT-GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 || ||| ||||| ||| ||||||||| | | | | || | ||| | | Sbjct 13112 GATGCGGTTCAGGTTCTTGCA-CACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGT 13170 Query 153562 AGGTCATTTCGTCG-ACGCGTACGCATCGATTCACG--------GCAATAGACGCCAGAT 153612 | ||| |||| | || || | | || || ||| ||||| |||||||| | Sbjct 13171 ATGTC--TTCGAGGCACCGGTGC-CCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGT 13227 Query 153613 TACAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTG 153671 | || || || ||||| | ||||| |||||||| | ||||| | ||||||||| | Sbjct 13228 TGCACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAG 13286 Query 153672 CATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGC 153731 | || || ||||| || | ||| || || ||||| || || ||| ||| | || Sbjct 13287 CTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGG 13346 Query 153732 ATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGC 153790 | | || ||| ||||| | ||||| |||| ||| | | || ||| | |||||| Sbjct 13347 ACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT-AGCGTACCACAGCTTCTGCGC 13405 Query 153791 --TCGCA-CCCGC-TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAA 153846 | || ||| || | ||||||||||| |||||| ||||||||| |||| Sbjct 13406 CTTGACAGAGCGCTTGGC----GCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAA 13461 Query 153847 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACA 153906 |||| ||||| |||||||| || || || || |||| || |||||||||||||| Sbjct 13462 ACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCA-- 13519 Query 153907 TATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| ||| || |||||||||||||| || | ||| ||||| | Sbjct 13520 ----GTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGA 13575 Query 153961 TGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCAC 154015 |||||||||| | ||| |||||| | ||||| ||||| ||||| | | Sbjct 13576 ACAGGTCGCGCG-CGCGCACTTCCTCCTTG-CCATGGTTCTTGCG---CAGATCAATAAA 13630 Query 154016 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TT 154072 | | | ||| | |||||| || || | ||||| || | ||| || ||| || Sbjct 13631 TTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTT 13690 Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 |||||||| || |||| |||| || | |||||| | ||||| | |||||| | | || Sbjct 13691 GCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACC 13750 Query 154133 GCTTGC-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | |||| ||||| || ||| | ||| || || | | || | || Sbjct 13751 G-TTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGT 13809 Query 154192 TAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | | ||||| ||||| ||||| ||| |||| || ||| ||| ||||| | Sbjct 13810 TCAGACCAATACCGCCGGCCGT-CTTGCTGATCATCGCA---CAGGTCTTGAGCGTGTCG 13865 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 || || || ||||| ||||| | | | | ||| ||||| ||||||| || Sbjct 13866 TATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGG 13925 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 || |||| || || || ||||| || |||||| ||||| || | | ||| Sbjct 13926 TTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATG 13985 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | |||||| ||||| ||| | | || |||||||| ||||||| ||||||||| Sbjct 13986 TAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGC 14045 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||| || || || || || Sbjct 14046 ATGAGCATGTGCTGGGGGCGCTCCGCAAC 14074 >seq788 Length=40807 Score = 197 bits (218), Expect = 1e-45 Identities = 323/461 (70%), Gaps = 11/461 (2%) Strand=Plus/Plus Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 |||| || | | |||||| | |||||||| ||| ||||||||| | ||||| || || Sbjct 2401 CGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGG 2460 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 | |||||| ||||||| | | || | | ||| | ||||| || ||| ||||| Sbjct 2461 CTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTC 2520 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 |||||| | || |||||||| || || |||||||| |||||||| || ||| | || Sbjct 2521 GAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAG 2580 Query 52562 GACGCGCGTGACCGAAAAATTGG-ATTCGGACAC---GATCCTGAGCATGTTCAAGGAGG 52617 | | ||| ||| | | | | ||||| || || |||| ||| |||| Sbjct 2581 C---CACCTGAA-GAAGCGTGCGCACCCTGACACAGTGAACC---GCATCATCACCGAGG 2633 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677 | ||||| || || |||| ||||| || | ||| |||| || |||| | ||||||| Sbjct 2634 CTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGA 2693 Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 |||||| ||||||| ||||||| |||||||||||||| || ||| | || | |||| Sbjct 2694 ACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCG 2753 Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | | || ||| ||| |||| | || || || || |||||| | ||||| ||||| Sbjct 2754 GCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCC 2813 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 |||||||| | |||||||||||| || || | ||| ||| Sbjct 2814 AGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTAT 2854 >seq644 Length=45588 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || || ||||||||| || ||||| | | Sbjct 6243 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 6184 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||||||||||||||| || || || ||||| ||| || || | ||| Sbjct 6183 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 6124 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | |||||| ||||| | || | ||| || ||||||||||| || | Sbjct 6123 G-TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGA 6065 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 6064 CGAAGATTTGCATGGC 6049 >seq342 Length=6017 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||| || || || |||| | Sbjct 3564 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 3505 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 3504 GATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 3445 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||||||||| || | ||| || || || || || || || Sbjct 3444 CTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGAC 3385 Query 138603 AAAAATCTGCATGG 138616 || | ||||||| Sbjct 3384 GAACACTTGCATGG 3371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256010621600