Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq788 147 2e-30 seq644 136 4e-27 seq266 116 4e-21 seq342 113 4e-20 >seq788 Length=40807 Score = 147 bits (162), Expect = 2e-30 Identities = 298/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Plus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| |||| ||||||||| ||||| | || || | | Sbjct 2426 GCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTC 2485 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | || || Sbjct 2486 AAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAG 2545 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 |||||||||||| |||||||||||||| | || | || || | ||| Sbjct 2546 GGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGA-------AGAAG----- 2593 Query 47327 CGTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 ||||| |||| | ||| || ||| | |||| || || ||||||||| ||| Sbjct 2594 CGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGAC 2653 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 ||||| | || || |||| | || | | || ||||||||| | ||| | || Sbjct 2654 TTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAG 2713 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||| || ||||| || |||||||||||||| | || | || ||| ||| || Sbjct 2714 TACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAAC 2773 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 | ||| || ||||| |||||| | ||||| |||||| |||||||| | ||||||||| Sbjct 2774 TCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTC 2833 Query 47559 GAGAAGCGCGTCGGCGAATAT 47579 ||| ||||| | ||| ||| Sbjct 2834 GAGCGCCGCGTTGCCGACTAT 2854 >seq644 Length=45588 Score = 136 bits (150), Expect = 4e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || ||||||| || || ||||| || |||||| | Sbjct 6243 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 6184 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 6183 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 6124 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 6123 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 6064 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 6063 GAAGATTTGCATGGC 6049 >seq266 Length=19737 Score = 116 bits (128), Expect = 4e-21 Identities = 943/1491 (63%), Gaps = 96/1491 (6%) Strand=Plus/Plus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || ||||||||||||| ||||| ||||| || || || | || || | |||||| ||| Sbjct 12634 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 12693 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 ||||||| || |||||||| || || ||||| ||| | || || |||||| || Sbjct 12694 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 12753 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAA 146238 ||| ||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 12754 CCATCAGCAGCGAGTTGCGCAGACCGTG-CTGGGCAATCTTTGCCTTGAGCGAGGCCCAG 12812 Query 146239 TTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGA 146296 | ||||| | |||| || | || | ||||||| |||| ||| ||| Sbjct 12813 TCCCACA---GGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAG 12869 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCT 146354 ||||| || |||||||| || || | || | || | ||||| |||||||| Sbjct 12870 GCAGGG--CTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCT 12925 Query 146355 AGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATC-----ATGTAGTTGACGCTCCTG 146409 |||| |||| | ||| |||||||| |||| || || | ||| Sbjct 12926 GCGCTCCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGC----- 12980 Query 146410 GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTAT 146468 ||||||| ||||||| | || ||| | | | || || || ||||| || ||||| | Sbjct 12981 GCCTCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGAC 13039 Query 146469 CCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC---AGTGGGATA 146525 |||| ||| | ||||||||| | |||| | || | || | | | ||| || Sbjct 13040 ACCGATACCGATGGGGCGGTGCCGCATGTTCGAG--CGACGTGCACTCTCCACAGGG-TA 13096 Query 146526 GTGGTTGCTGTCGATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCA 146584 || |||| | |||||||| ||| || || |||| || | ||||| || || | Sbjct 13097 GTAGTTGATATCGATGATGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACA--CG-TCGT 13152 Query 146585 GCAGGACAT---AGTCAAATGTTTTAGTTTTAACGTTGACG-CACTT---GTTGACGGCG 146637 ||||| | ||| |||| || | | || || | || | || | | ||| Sbjct 13153 GCAGGCGTTGGAAGTTGTATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCG 13212 Query 146638 --ATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGG 146695 || || |||| ||| || || || ||||||||| || |||| | |||||| | Sbjct 13213 CAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 13272 Query 146696 CGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGC 146752 ||||||||| || |||||| |||||| || || |||||||| |||| || Sbjct 13273 TGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACT---CTTGCGGTTCG 13329 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATC 146812 | ||||||||| || | | || || || || | | | ||||| ||| | | Sbjct 13330 CCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGC 13387 Query 146813 TAAACAAATCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTC 146870 | || | || ||| ||||| || | | | | | ||||| ||||| Sbjct 13388 GTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTC 13447 Query 146871 GTACAATATTTCAAAA--CTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGA 146928 ||||| ||||| || | || || ||| || || || ||| ||| Sbjct 13448 GTACAGAGCATCAAACTCCTCG--CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGG 13505 Query 146929 CAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAA 146988 || | ||||||||| || |||| | || || ||| |||| |||||||||||| Sbjct 13506 CACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCAC 13565 Query 146989 AGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTG 147048 || |||| | || |||||| || | ||||| ||| ||| | | | || | Sbjct 13566 AGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCC-ATGGTTCTTGCGCAGATC 13624 Query 147049 AGGACAT-CGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCG 147107 | | || | ||| |||| ||||| ||||||| ||| || | ||||| || Sbjct 13625 AATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCG 13684 Query 147108 CTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACAC 147164 ||| |||||||| || |||| |||| || |||| ||| | || || | ||||| ||| Sbjct 13685 CTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCAC 13744 Query 147165 GAGGCCG---------CCGGATTTTGTGGTGCCGTTGTATTGAGCGCTGACGC------- 147208 | ||| ||| || ||| | || |||| |||| | | ||| Sbjct 13745 AATACCGTTGCTCACACCG---TTCGTGCCGGCGATGTAC-GAGCCC-GTCGCACGAATG 13799 Query 147209 -TTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGC---GGACTCGTGC 147264 | || | | |||| || | ||| ||| || || |||| || || || | || Sbjct 13800 TTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGC 13859 Query 147265 AAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACAC 147324 || | ||| || || ||||| ||| ||||| || | ||||| ||||| || Sbjct 13860 ---GTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 13916 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGC 147382 |||||||| |||||| || ||||| || || ||||| || || | | | Sbjct 13917 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 13976 Query 147383 CCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCA 147442 | ||| | | ||| ||||| || || |||||| ||||| |||||||| ||| | | Sbjct 13977 TCGGACATGT-AGTTG-TACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 14034 Query 147443 GGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 ||||||||||||||||||||||||||| || ||||||| | | |||||| Sbjct 14035 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGA 14085 >seq342 Length=6017 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 3602 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 3543 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||||| ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 3542 CTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 3483 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 3482 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 3423 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 3422 ACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 3371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475494677927200