Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq266 134 1e-26
>seq266
Length=19737
Score = 134 bits (148), Expect = 1e-26
Identities = 707/1117 (63%), Gaps = 55/1117 (5%)
Strand=Plus/Minus
Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCA 123291
||||||| || || ||||| ||| | | ||| |||| |||||||||||||| |||
Sbjct 13740 CCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC 13681
Query 123292 AAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATT 123351
||||| | |||||||| || || ||||||||| || || | || ||| | ||
Sbjct 13680 CGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATC 13621
Query 123352 TAAAACGCAA----CATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTA 123407
| ||||| ||||| ||| ||| | || ||||| |||| || |
Sbjct 13620 TG---CGCAAGAACCATGGCAA-GGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 13565
Query 123408 TGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGT 123467
||| | |||||| |||| ||||| || || || | |||||| |||||||| |||||
Sbjct 13564 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 13505
Query 123468 CCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCG 123527
|||| ||| || || || ||| || ||| | ||||||| | |||||| |
Sbjct 13504 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 13445
Query 123528 CAATACGAGCGCGAAGGCA-----AACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCA 123582
| ||||||||||| ||| || | | |||| | | | | || || |
Sbjct 13444 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGCAGAAGCTG---TGGT-- 13390
Query 123583 AATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCT 123642
| ||| |||| | ||| | || || || | || | | || ||||| ||| |
Sbjct 13389 ACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGG 13330
Query 123643 GCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCG 123702
||| | || | || |||| ||| |||| || || || | || || ||| | |
Sbjct 13329 CGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGG 13270
Query 123703 AAATTATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGATT--- 123758
| |||||||| |||||| |||| | || || ||||| || |||| ||||||
Sbjct 13269 AGATTATCGAGTACAGCTC-GCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCG 13211
Query 123759 --------------TGCGTGAATCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGC 123804
|| | | | || ||| ||||| || | || |||||| |||
Sbjct 13210 CTGCCGACGTTTATTGAGGGCACCGGTGCCTCGAAGACA-----TACAACTTCCAA-CGC 13157
Query 123805 TCAAACG-CATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTT 123863
||| | | | ||| || ||||| ||||| || |||||| | || |
Sbjct 13156 CTGCACGACGTGTCGAAAGTGGTGTGCAAGAACCTGAACCGCATCATCGATATCAACTAC 13097
Query 123864 TATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATT 123923
|| ||| ||||| || ||| || || || ||| | || |||| | || |
Sbjct 13096 TACCCTGTGGAGAGTGCACGTCGCTCGAACATGCGGCACCGCCCCATCGGTATCGGTGTC 13037
Query 123924 CAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAG 123983
|| || | ||||| ||||| | || || || |||| ||| ||| | || ||
Sbjct 13036 CAGGGCCTTGCCGATGCGTTCATGATCATGGGCTATCCGTTCGACAGCCAGGAGGCGCGC 12977
Query 123984 TTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAA 124043
|||| ||| ||| || || || ||||| | | || |||||| ||||||||
Sbjct 12976 CTGCTGAATGTGCAGATCTTTGAGACCATTTACCATGCGGCCTTGGAGCGCAGCTGCGAG 12917
Query 124044 CTTGCGAA--AATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTA 124101
|| ||| ||| | ||| | ||||| | |||| ||||||||| || | ||
Sbjct 12916 CTGGCGGCCGAAT--ATGGCACATACGAGACGTACGAGGGCAGCCCTGCCTCGCAGGGCC 12859
Query 124102 TTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT--TT 124159
| ||||||||||||||||||| || ||| | | ||||||||||| || | |
Sbjct 12858 TCCTGCAGTACGACATGTGGAACCGCACGCCGTCGGACCTGTGGGACTGG-GCCTCGCTC 12800
Query 124160 AAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGAC 124219
|| ||| | | | | ||||||| |||| ||||||||| || ||||| |||||||||
Sbjct 12799 AAGGCAAAGATTGCCCA-GCACGGTCTGCGCAACTCGCTGCTGATGGCGCCCATGCCGAC 12741
Query 124220 GGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTT 124279
||| |||| ||| || | || |||||| | ||| ||||||| ||| | ||| |
Sbjct 12740 GGCCTCCACGAGTCAGATCCTTGGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACAT 12681
Query 124280 GTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTG 124316
||| |||| || ||| | ||||| || || || |||
Sbjct 12680 TTACATGCGCCGTGTGCTTGCCGGTGAGTTCCAGGTG 12644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451997380458800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |