Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq266 237 2e-57 >seq266 Length=19737 Score = 237 bits (262), Expect = 2e-57 Identities = 1038/1623 (64%), Gaps = 41/1623 (3%) Strand=Plus/Plus Query 115681 CCCCGATCCGCCGCCATATC---AATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 || || || || |||||||| |||||| |||| |||| ||||||||||| || Sbjct 12456 CCACGGTCTGCGGCCATATCGAGAATCAC---CTTCTGGCTGATCTCCCACACAGTCTTG 12512 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 |||||| ||| || | || ||||| | |||| || ||||| ||||| || | Sbjct 12513 TAGAGGGCCTTGATGTGGTCAGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCA 12572 Query 115798 ACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 | || | |||||| | | || |||||| || | || || || || | Sbjct 12573 ATAATCTTCTGCTTCATCGAGTCATT--CCAGAGGCCCAGCTCGACAAGCTCGCGCAGCA 12630 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 | | ||||| || |||||||| || || || | || || |||||| ||| Sbjct 12631 GCCACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCG 12690 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| |||||||||||||| ||| || | ||| || |||||||| || ||||||| Sbjct 12691 TGTACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGG 12750 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 | ||||| || || |||||| ||||| | ||| | ||||||| | | ||| Sbjct 12751 GCGCCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCC 12810 Query 116036 AGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095 |||| | | | | | | | |||||| || |||| |||| || || || | Sbjct 12811 AGTCCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGG 12870 Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155 | || ||||| | ||||| |||| ||| | | |||||| ||| |||| || Sbjct 12871 CAGGGCTGCCCTCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCT 12930 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 116215 | | ||| || || || || |||||||| || | |||||| ||||| | | Sbjct 12931 CCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGC 12990 Query 116216 AATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 116274 || |||| || | || | || || |||| || || || |||||||||| || Sbjct 12991 TGTCGAACG-GATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCG 13049 Query 116275 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 116334 || ||||| || | ||| || || || || ||||||| || || | || ||||| Sbjct 13050 ATGGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCG 13109 Query 116335 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT-- 116392 || | | || || || ||| || || || | | || || || || | | | Sbjct 13110 ATGATGCGGTTCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTG 13169 Query 116393 CAAAACTGCGAGTCTC----TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | || |||| | | | | | | || | || || || || |||||||| || Sbjct 13170 TATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTG 13229 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 ||||||| ||||| ||| ||||||| ||||| ||||| || | || || ||| Sbjct 13230 CACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTC 13289 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 || || ||||||| |||||| || || ||| ||| || |||||||| || | | Sbjct 13290 TTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 13349 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGG 116627 | || | |||||||| |||| | || ||| ||||| | ||| | | || ||| || | Sbjct 13350 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTG 13409 Query 116628 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687 |||| | ||||| || ||||| ||||||||| ||| || || |||||||| || Sbjct 13410 -ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTC 13468 Query 116688 ACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 ||| ||| || | || ||||| || | || || | || ||||| | || Sbjct 13469 -GCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGT 13527 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 || || || || |||||| || || || ||||| |||||| ||| || || || Sbjct 13528 TCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCG 13587 Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866 ||| |||| || | || || || |||| || | ||| || | | |||| || Sbjct 13588 CGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGT 13647 Query 116867 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACAT 116923 ||||||| |||||||| | ||| | | ||| ||| || |||||| || | Sbjct 13648 GCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGT 13707 Query 116924 ACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC----ATCAGATTGGCCA 116979 | | |||||| ||| | ||||| ||||| || | ||||| ||| | || Sbjct 13708 AGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACA----CCG 13763 Query 116980 TTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037 || || || ||| |||||| | | || | | | |||||||| || |||||||| Sbjct 13764 TTCGTGCCGGCGATGTACGAGCC--CGTCGCACGAATGTTGTGGATGTTCAGACCAATAC 13821 Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097 | || ||| ||| ||| || || | |||| || |||| || || ||||||| Sbjct 13822 CGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCG 13881 Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGT 117157 |||| |||| | | |||||||| ||||||||| || | || || || || | Sbjct 13882 AGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCAT 13941 Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT--TGGGACATCTTATCGTAGGTCTC 117215 |||| ||||| || | |||||| || | | ||| | |||||| | | ||| ||||| Sbjct 13942 TGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTC 13999 Query 117216 CAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTG 117275 | | | | ||| || ||||| || |||| | ||| ||||| | ||||| || Sbjct 14000 GATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTG 14059 Query 117276 GGG 117278 ||| Sbjct 14060 GGG 14062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499301094800