Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq788 410 1e-109
seq342 122 9e-23
seq644 107 2e-18
>seq788
Length=40807
Score = 410 bits (454), Expect = 1e-109
Identities = 593/827 (72%), Gaps = 25/827 (3%)
Strand=Plus/Minus
Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686
||| ||||| || | || |||| | || ||| | |||||| || |||||||| |
Sbjct 2836 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 2777
Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743
| |||||||||||| | |||||| ||| ||||||||| | ||| ||||| |||||
Sbjct 2776 CGAGTTGTAGTGCTTCGGGTTGCCGA---GGTTGACGAGCAGGCGGTCCGCCACAAACTC 2720
Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802
||||| || ||||| | ||| | | | || | ||| || |||| || || |
Sbjct 2719 AATGTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGAAACAGGCAAGGCGTCAG 2661
Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCC 132858
| | |||| ||||| ||||| || || ||||||| ||| ||| || | |
Sbjct 2660 TCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGT 2601
Query 132859 GCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
|||| || || || || |||||| | || ||||||||| |||| ||||
Sbjct 2600 GCGCACGCTTCTT----CAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 2545
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
|| || | || ||||| ||||| ||| | || || |||||||||||||| || |||
Sbjct 2544 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 2485
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || |||| ||| || |||||| || |||| |||||||||||| || || |||
Sbjct 2484 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 2425
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
|| |||||||| ||||| ||| || | |||||||||||| ||||| ||||||
Sbjct 2424 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 2365
Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA--ACAAACGGAGTTTCTCTTCCG 133156
|| | |||||| || ||||| ||||| ||||| | | |||| | || ||||
Sbjct 2364 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCA--CGCTGCTCCG 2307
Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216
|| | ||| |||||||||||| ||| ||| | |||||||| | |||||||||
Sbjct 2306 GCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCA 2247
Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275
||| || |||||||| ||||| || |||||| | ||||||| || | || ||| |||
Sbjct 2246 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTC-GGCGCTGAAGCGC 2188
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
|||||||| || ||||||||||| ||||| || || || |||||||| ||||| |
Sbjct 2187 TCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTC 2128
Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392
| || |||||||| |||||||||| || | ||||||||| || |||||| || |||
Sbjct 2127 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGG 2068
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|||| ||||||| ||||||| ||||| |||||||| || ||||||||
Sbjct 2067 TCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 2021
>seq342
Length=6017
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||| | ||||| || || || || || || || |||||| |||| || ||| | ||
Sbjct 3373 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 3432
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| ||||| || || | ||||||
Sbjct 3433 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 3492
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| |||||||| || | ||||| || | ||||||||||
Sbjct 3493 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 3552
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| ||||| || | ||||||||
Sbjct 3553 ATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTGCG 3587
>seq644
Length=45588
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || || ||| | || |||||| | |
Sbjct 6052 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 6111
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| ||||| || || | ||||||
Sbjct 6112 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 6171
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || ||||| || |||| ||||| || | ||||||||||
Sbjct 6172 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 6231
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
|| || ||||| ||| || ||||| | ||||| ||
Sbjct 6232 ATTCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCG 6266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500166360275200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |