Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq478 125 5e-23 >seq478 Length=55648 Score = 125 bits (138), Expect = 5e-23 Identities = 451/701 (64%), Gaps = 6/701 (1%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 |||||||| || ||||| || ||||| || | | || | || | ||||| | || Sbjct 27496 ACAAGACGGTTGTCAAAGTCCTCACCACCAAGGTGCGTGTCACCCGCGGTAGCCTTAACC 27555 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || || | | || || | ||||| || |||||||||| || Sbjct 27556 TCGAAGATACCCTCCTCGATCGTCAGGAGCGACACATCGAAAGTACCACCACCCAGGTCG 27615 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || |||||||||||| | || || | || || || ||||| || |||| ||||||| Sbjct 27616 AAGATAAGTACATTCTTCTCGGACTCGTCCTTCTTGTCGAGACCGTAGGCAATAGCAGCA 27675 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || || || ||||| || | || ||||| ||||| ||||| || || || || Sbjct 27676 GCCGTAGGCTCGTTAATGATACGCATGACATTGAGACCCGCAATCACACCAGCGTCCTTG 27735 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || || || | || || ||||| || || || || ||||| | || ||||| | || Sbjct 27736 GTAGCCTGGCGCTGCGAGTCGTTGAAGTAGGCCGGGACAGTCACCACAGCATCCTTCACG 27795 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 || |||| ||||| || || | ||| ||| | | ||| || || ||| Sbjct 27796 TCCGAGCCAAGGTAAGCCTCAGCGGTCTCACGCATCTTAAGCAGGACCATCGAGGAGATT 27855 Query 518375 TGTTCTG--GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTAT 518432 | || | | ||| || ||| ||| | ||| || | | || ||| Sbjct 27856 TCCTCAGGAGTGAAGAT--CTTCTCCTCACCCTTGTATTCGACGCGGATAACGGGCTTAC 27913 Query 518433 TACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCA 518491 | | ||| || || ||||||| |||||||| || ||||| || | ||| Sbjct 27914 CAGAGCGGTCAATGACCGAGAACGGCCAGTGCTTCATATCCGACTGAAC-CTCAGTGTCG 27972 Query 518492 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCA 518551 || || | | |||||| | || || || || || | ||| ||| || || || || Sbjct 27973 TTGAACTTGCGACCAATCAGACGCTTGGCGTCGAAGACAGTGTTGTGGGGGTTCATAGCC 28032 Query 518552 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 518611 | || | ||||| ||||| || |||||| | || || || || || | ||| || || Sbjct 28033 ACCTGGTTCTTGGCGGCATCACCGATCAGACGCTCCGTGTCGGTGAAGGCAACGTACGAA 28092 Query 518612 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 518671 ||||| || || ||||| || || || ||||| | || || | || ||||| || Sbjct 28093 GGAGTCGTACGGTTACCCTGGTCGTTGGCAATGACCTCGACACGGTCGTTCTGCCAGACG 28152 Query 518672 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | |||||| | || || || ||||||||||||| ||| Sbjct 28153 GCCACACAAGAGTAGGTGGTACCCAAATCAATACCAACAGC 28193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780771288007180